ggKbase home page

SCN18_13_7_16_R1_B_scaffold_1339_14

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 12915..13376

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KKF7_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 66.0
  • Bit_score: 62
  • Evalue 2.40e-07
membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 91.0
  • Bit_score: 66
  • Evalue 6.20e-09
Tax=BJP_IG2102_BRC1_58_13 similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 90.0
  • Bit_score: 73
  • Evalue 1.90e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGAAAAATCTGGTCAGGCTGGCGGCTGCGTCTGCTCTCGCCGCCGGCATCGCGATGATGGCATCCGCTCCCGCCAATGCCGGTGTGGGAATTTCCGTCGGCGTCGGCGGCTATTATCCACCGGCTTATTACGGGCCAACCTATTATGGCCCGCGCTATTACGGCCCGCGTTACTATGGCCCTGCCTATTATGGACCGCGCTATTATCGCGGCGCCTGCGATTATTATGCGCCTTACTATGATCCCTATGCCTGCGACTGGCCGGTTTATTCTTCGCCGGTCTATGTCGGCGGCGTCTGGTATACCGGCCCGATCCGTTATCGCAATTGGGGCGGTCACCGCTGGTACTGGGTCAATCGCGGCTGGCATCGCGATGAATGGCGCGGTCCCCGTCCCGGCCACATCCGCGGCGGCGTCCGTGTTGGCGGTCACGGCTTTCACGGCGGCCACCACCGCCACTGA
PROTEIN sequence
Length: 154
MKNLVRLAAASALAAGIAMMASAPANAGVGISVGVGGYYPPAYYGPTYYGPRYYGPRYYGPAYYGPRYYRGACDYYAPYYDPYACDWPVYSSPVYVGGVWYTGPIRYRNWGGHRWYWVNRGWHRDEWRGPRPGHIRGGVRVGGHGFHGGHHRH*