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SCN18_13_7_16_R1_B_scaffold_701_28

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 24259..24864

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:KIL97415.1}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 201.0
  • Bit_score: 332
  • Evalue 3.00e-88
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 331
  • Evalue 1.00e-88
3-isopropylmalate dehydratase small subunit n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=LEUD_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 331
  • Evalue 3.70e-88

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAACCATTCACCACCCTGACGGGGGTTGCCGCCCCCCTGCCGATGATCAACGTCGATACCGACATGATCATCCCCAAGAACTTCCTGAAAACCATCAAACGCACCGGATTGGGCAAGGCGCTGTTCTTTGAAATGCGCACCAATGCCGACGGCAGCGAAAACCCCGATTTCGTGTTGAACAAGCCGGCCTACCGCAAGGCGCAAATTCTTGTGGCCGGTGAGAATTTCGGCTGCGGGTCGAGCCGGGAGCACGCACCCTGGGCCCTGCTTGATTTCGGCATCCGCGTGGTGCTGGCCCCGTCTTTCGCCGATATTTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCGATCAAGCTGCCGCAGGAAGACATCGACAAACTGCTGGACGATGCGGAGCGCGGCGCCAATGCGGTGATCACCGTCGATCTGGCGAAGCAGGAAATCCATGGGCCCGATGGCGGTACCATCAACTTTGAGATCGACCCTTTCCGCAAACAATGCCTGCTGAATGGCTGGGACGATATTGCGCTGACCTTGCGCAACGAAGACAAGATTTCCGCATTTGAGGCACGGCGCAAAGCGCAAACGGCCTGGCTGTAA
PROTEIN sequence
Length: 202
MEPFTTLTGVAAPLPMINVDTDMIIPKNFLKTIKRTGLGKALFFEMRTNADGSENPDFVLNKPAYRKAQILVAGENFGCGSSREHAPWALLDFGIRVVLAPSFADIFYNNCFKNGILPIKLPQEDIDKLLDDAERGANAVITVDLAKQEIHGPDGGTINFEIDPFRKQCLLNGWDDIALTLRNEDKISAFEARRKAQTAWL*