ggKbase home page

SCN18_13_7_16_R1_B_scaffold_736_14

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(15469..17067)

Top 3 Functional Annotations

Value Algorithm Source
(R)-citramalate synthase {ECO:0000313|EMBL:CDO60766.1}; EC=2.3.1.182 {ECO:0000313|EMBL:CDO60766.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 531.0
  • Bit_score: 743
  • Evalue 1.20e-211
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS43_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 531.0
  • Bit_score: 736
  • Evalue 1.00e-209
putative alpha-isopropylmalate/homocitrate synthase family transferase similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 531.0
  • Bit_score: 736
  • Evalue 2.90e-210

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1599
GTGAGCAAGGAACGCCTTTATATCTTCGACACCACCTTGCGCGATGGTGCGCAAACGCAAGGCGTCGATTTCTCGGTGGAAGACAAACGCCAGATCGCGCTCGCGCTCGACAGTCTCGGTGTCGATTACATCGAAGGCGGTTTTCCCGGCGCCAACCCATCCGACACCGCCTTCTTTGCGGAGCGCCCGCCTTTCAAAAACGCACGCTTCACCGCCTTCGGCATGACCAAGCGCGCGGGCCGCAGCGCCGCCAACGATCCCGTCCTGGCCGCGGTGATGGATTCGCCGGCCGAAGCCAATTGTCTGGTCGGCAAGACCTGGGATTTTCAGGTCGATGTCGCGCTCGAAATTCCGCGCAGCGAAAATGTCGATTGCATCGCGGATTCGATTGCGGCGGTGAAGACAAAGGGGCGTGAGCCGCTTTTGGATGCCGAACATTTCTTCGACGGTTACAAGGCCAATCCGGATTACGCGCTGGAATGTATCCGCGCGGCCTTCGATGCCGGTGCCAATTGGCTGGTACTGTGCGATACCAATGGCGGCACCATGCCGGAAGATGTTTATCGTATCGTGTCGGCGGTGAAAGCGAAATTGCCCACCGCCAATTTCGGCATCCATGCCCACAATGATACCGAACAGGCCGTTGCCGTCAGCCTTGCCGCCATTCGTGGCGGCGCGCGGCAGGTGCAGGGCACGTTGAACGGGCTTGGCGAACGCTGCGGCAATGCCAATCTCTGTACGCTGCTGCCCAATCTGCTGCTGAAAGAACCTTATGCCAGCCAGTTTGAAACCGGCGTCAGCCGCGAAAATCTGGCGCGGTTGACCCAGGTGTCGCGTCTGCTGGATGAAATCCTCAACCGTGCGCCTAACCGGCATGCGGCCTTTGTCGGGCCGTCCGCCTTCGCGCACAAGGGCGGGCTTCATTCCTCGGCGGTGCTGAAAGATTCGCGCACCTATGAACATGTGCCACCCGAAAGCGTGGGCAATACCCGCAAGATTCTGGTGTCGGATCAGGCCGGCCGCTCCAACGTATTGGCCCGGCTGGCCGAACTCGGCATCGATGTGGACCCGAAAGACAGCCGCGTCGCCCGCCTGCTGGAAGAGGTGAAGCAGCGCGAGTTTCTGGGCTATGCTTATGAGGGGGCGGAGGCTTCGTTCGAGCTTCTCGCCCGCCGCGCGTTGGGGCAGGTGCCGGATTATTTTGCGGTCGAAAGCTTCCGTGTCATCGTGGAGCGCCGTCACAATGCGCTTGGCGATCTTACCACGGTGTCCGAAGCGGTGGTAAAGCTGACGGTGCACGACACCGCCATTCACAATGTGGGTGTTGGCAACGGCCCGGTGAACGCACTGGACCAGGCGCTGCGCAAGGACCTCGGCGAATATTCCGGTTATCTGAAAGATTTGCGGCTGGTGGATTACAAGGTGCGTATCCTCACGGGCGGCACGGAGGCCGTGACCCGCGTGATGGTCGAAAGTGCGGATGGCAAAGGCAATCGCTGGTCCACGGTCGGTGTCTCCCCCAATATCGTCGATGCCTCGTTCGAGGCCCTGTCGGATTCCATTCGTTACAAGCTTCATCGCGAAGGCGCCCATGCTTGA
PROTEIN sequence
Length: 533
VSKERLYIFDTTLRDGAQTQGVDFSVEDKRQIALALDSLGVDYIEGGFPGANPSDTAFFAERPPFKNARFTAFGMTKRAGRSAANDPVLAAVMDSPAEANCLVGKTWDFQVDVALEIPRSENVDCIADSIAAVKTKGREPLLDAEHFFDGYKANPDYALECIRAAFDAGANWLVLCDTNGGTMPEDVYRIVSAVKAKLPTANFGIHAHNDTEQAVAVSLAAIRGGARQVQGTLNGLGERCGNANLCTLLPNLLLKEPYASQFETGVSRENLARLTQVSRLLDEILNRAPNRHAAFVGPSAFAHKGGLHSSAVLKDSRTYEHVPPESVGNTRKILVSDQAGRSNVLARLAELGIDVDPKDSRVARLLEEVKQREFLGYAYEGAEASFELLARRALGQVPDYFAVESFRVIVERRHNALGDLTTVSEAVVKLTVHDTAIHNVGVGNGPVNALDQALRKDLGEYSGYLKDLRLVDYKVRILTGGTEAVTRVMVESADGKGNRWSTVGVSPNIVDASFEALSDSIRYKLHREGAHA*