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SCN18_13_7_16_R1_B_scaffold_2261_12

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(8412..9599)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXV1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 390.0
  • Bit_score: 520
  • Evalue 8.40e-145
Nitrogen regulation protein NtrX {ECO:0000313|EMBL:CDO61073.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 393.0
  • Bit_score: 531
  • Evalue 5.10e-148
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 390.0
  • Bit_score: 520
  • Evalue 2.40e-145

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
CAGATCAAGCAGGAACATCCCGATCTGCCTGTGGTGATGATCAGCGGCCATGGCACCATCGAAACCGCGGTCGCCTCGATCAAGAAGGGCGCCTATGACTTTATCGAAAAGCCGTTCAAGTCGGACCGCCTGATCCATGTGGTGGGCCGCGCGCTGGAAGCCGCACGCCTGCGCCGTGAAGTTCAGGAGCTGAAACTGAAGGCCGGCGACGATGCCGAGCTTGTCGGTGTTTCCTCCGCTATCTCGCAAGTCCGCCAGATGGTGGACAAGATTGCCCCCGCCGGCAGCCGCGTGATGATCACCGGCCCGTCCGGTTCCGGCAAGGAGGTGGTGGCGCGTTTGATCCACGCGCGTTCGCGCCGTGCCGGCAATGCCTTTGTCGCCGTCAATTGCGCCAACATGTCTCCCGCCCATATCGAGGCCGAATTGTTCGGCGTTGAACAGGCGGATTCCCCGCGCAAGACTGGGCTGCTGGAACTCGCGCATAACGGCACGCTTTATCTCGACGAGATCGCCGACATGCCGCTCGAAACACAGGGCAAGGTTTTGCGCGTTCTGGTCGATCAGACATTCCTGCGCCTTGGCGGCAACACACGGGTTCAGGTCGATGTGCGGGTGGTTTCGTCCTCCACCCGCGATCTGCATGTCGAAATCGCCAATGGCCGTTTCCGCGAGGATCTTTATCACCGGCTGAATGTGGTGCCGGTGCGTGTGCCGTCGCTGGCGGAACGGCGCGACGATATTCCGCTTCTGGTCTCGCATTTCATGAAGCGGCTCTCGGCCGCTTCCGGTCTTGCCATTCGCGAAATCGGCGACGATGCGATGGCGGTGCTGCAGGCCCACAACTGGCCCGGCAATGTGCGCCAGTTGCGCAATATCGTGGAACGACTATTGATCCTTGCCACCGATGATGCGGCCCAGGCGATTTCGGCCGATCTTCTGCCGCCGGATCTGGGCGCCAGCGTGCCCTGGGGCAATGCAGGCAAGGGCGATCTTGTCATCTCGCTGCCCTTGCGCGAAGCGCGGGAGATATTCGAGCGCGACTATCTTCTGGCCCAGATCAATCGCTTTGGCGGCAATATTTCGCGCACGGCCGCCTTCATCGGGATGGAGCGTTCGGCGCTGCACCGCAAGCTGAAATCCCTGGGCGTCGGCCCCAATGGCCGCGATCAGACCTTCAACGCATGA
PROTEIN sequence
Length: 396
QIKQEHPDLPVVMISGHGTIETAVASIKKGAYDFIEKPFKSDRLIHVVGRALEAARLRREVQELKLKAGDDAELVGVSSAISQVRQMVDKIAPAGSRVMITGPSGSGKEVVARLIHARSRRAGNAFVAVNCANMSPAHIEAELFGVEQADSPRKTGLLELAHNGTLYLDEIADMPLETQGKVLRVLVDQTFLRLGGNTRVQVDVRVVSSSTRDLHVEIANGRFREDLYHRLNVVPVRVPSLAERRDDIPLLVSHFMKRLSAASGLAIREIGDDAMAVLQAHNWPGNVRQLRNIVERLLILATDDAAQAISADLLPPDLGASVPWGNAGKGDLVISLPLREAREIFERDYLLAQINRFGGNISRTAAFIGMERSALHRKLKSLGVGPNGRDQTFNA*