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SCN18_13_7_16_R1_B_scaffold_2408_3

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(196..909)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000255|HAMAP-Rule:MF_00564}; Short=RNase PH {ECO:0000255|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000255|HAMAP-Rule:MF_00564};; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_00564}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 237.0
  • Bit_score: 347
  • Evalue 1.40e-92
Ribonuclease PH n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RNPH_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 237.0
  • Bit_score: 347
  • Evalue 1.00e-92
rph; ribonuclease PH similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 237.0
  • Bit_score: 347
  • Evalue 2.80e-93

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCGCCCCAGCAAACGCGCGAAAGACCAGATGCGTGAGATCAGCCTCGAACCCGGCGTGTCGCGCTACGCCGAAGGCTCCTGCCTGGTGAAATTCGGCCATACCCATGTGCTGGTCACCGCCAGCCTGCAGGAACAGGCCCCGCCCTTCCTCAAAGGCAGCGGCAAGGGCTGGGTGACGGCGGAATATGGCATGCTGCCCCGTTCCACCCATGACCGCATGCGGCGCGAGGCGGCGCAGGGCAAGCAGTCCGGCCGCACCCAGGAGATTCAGCGCCTGATCGGCCGCTCCTTGCGGGCGGTGACGGATTTGGCTGCGCTGGGCGAACGCCAGATCGCGATCGATTGCGACGTGCTTCAGGCCGATGGCGGCACCCGCACCGCCTCCATCACCGGTGGTTTCGTCGCGCTGGCACAATGCGCGGCCTTCATGAAGAAGACCGGCATGATCACCAAGCCCCTGATCCTCGATCAGGTGGCGGCGGTGTCGTGTGGCATCTGGCAGGGCGAAGCGGTGCTCGACCTTGATTACGACGAGGATTCGCACGCCGGGACCGATGCCAATTTCGTCATCACCGGCAAAGGCGGGCTGGTGGAGATTCAGGGCACCGCGGAAGGCGAGCCCTTCAGCGACGAACAATTCACCGAATTGCTGCGGCTGGCGCGCAAGGGCGTGGGCGCGCTGGTGGATTTGCAGAAAAAGGCGCTGGCGTGA
PROTEIN sequence
Length: 238
MRPSKRAKDQMREISLEPGVSRYAEGSCLVKFGHTHVLVTASLQEQAPPFLKGSGKGWVTAEYGMLPRSTHDRMRREAAQGKQSGRTQEIQRLIGRSLRAVTDLAALGERQIAIDCDVLQADGGTRTASITGGFVALAQCAAFMKKTGMITKPLILDQVAAVSCGIWQGEAVLDLDYDEDSHAGTDANFVITGKGGLVEIQGTAEGEPFSDEQFTELLRLARKGVGALVDLQKKALA*