ggKbase home page

SCN18_13_7_16_R1_B_scaffold_4415_3

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(3542..4546)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NU16_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 27.9
  • Coverage: 308.0
  • Bit_score: 121
  • Evalue 1.30e-24
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.1
  • Coverage: 267.0
  • Bit_score: 119
  • Evalue 1.40e-24
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 304.0
  • Bit_score: 170
  • Evalue 3.30e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
TTGAATAGCAGAGGCGAGATCGACGTCCGCCAAATCAGACAAATAATCGAAGTATGCAGGTCTGGTGGAATAGGGCGAGCCGCCCGCGAACTCGGCATTTCCCAACCAGCACTCAGCCGAAGCATCGCGCGCATCGAAGATCAGCTTGGCACGGCGCTTTTCGAAAGGGCGGGCGATGGCGCGAAACCCACGCCGTTTGCCAATTACATCGTCTCTCGTGCGGTACCGCCGATGGAAAGCATCGCGACAATCGCGCGTGAAGTCAGAATGATGGCCAAAGGCGAATCCGGGCGGTTGCGCGTCGGCATGGGTCCGGTCATACGCCACCTCATCTTCCTGCCTGCCGTCACGACAATTCTGGGCGAATTCCCCAAGTTGAGCCTTAAGACCAAAATTGGAAGTACGCCGGACATCCTGAAATTGCTTACGACACGCGCCATAGATGTCGCGATAAGCTCCAGCGAATACTCCGAACTGGACGGTGCGCTCGATCAGGACCATAGCTTCGTGCGAACGGACCTCGTCACACTGAAGCTGTCTTTCTTTGCGCGCAAAGGCCACAAGATTTTAGAATCCGGCAAACCGCGCCAGATCGAGGAACTTCTGGATTATCCGATGGCGGGAATCGGAATGACGCGGCATCAACGGGCGTTTTTCCCTGCGAAGCTAAACGCCGGACAACGCCAGAATCTCGGCGCCTACCAAGTGGATGATTACGAACTGGTTCGCCACATCATTCTTAACTCAGATGCCATAGCTTACGCACCGTATCAGGTCTTCCAGGAAGACATCCGAAAGAAACGAATTTTCTTCGTCAACCGGGACCTGCAAATTCACCACCATTGCGTTGCGCTGGCACTGCGGGAGACCTGGCTTTTCCCGATGGTGCGAAACTTCGTAGAGATCGCAAAAAACGTATCCGGAAACCTGAACGATCCCGAATGGCAAGCGCAACAATCGCCCATCGCATCGAACGCTAAGAAATTAGAGCATCAAGCCCGATAA
PROTEIN sequence
Length: 335
LNSRGEIDVRQIRQIIEVCRSGGIGRAARELGISQPALSRSIARIEDQLGTALFERAGDGAKPTPFANYIVSRAVPPMESIATIAREVRMMAKGESGRLRVGMGPVIRHLIFLPAVTTILGEFPKLSLKTKIGSTPDILKLLTTRAIDVAISSSEYSELDGALDQDHSFVRTDLVTLKLSFFARKGHKILESGKPRQIEELLDYPMAGIGMTRHQRAFFPAKLNAGQRQNLGAYQVDDYELVRHIILNSDAIAYAPYQVFQEDIRKKRIFFVNRDLQIHHHCVALALRETWLFPMVRNFVEIAKNVSGNLNDPEWQAQQSPIASNAKKLEHQAR*