ggKbase home page

SCN18_13_7_16_R1_B_scaffold_19576_2

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(93..878)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRI1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 256.0
  • Bit_score: 335
  • Evalue 2.50e-89
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 256.0
  • Bit_score: 335
  • Evalue 7.20e-90
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS62514.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 256.0
  • Bit_score: 335
  • Evalue 3.60e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
TTGAACACCGTGCTTAAAATCGCCATCCCGGTTGGGCTGGGCATCGCCGTGATCGCGGCCTGGCAATGGGCGGTGACGGCGCTGGCGATCTCGCCCATCGTGCTGCCGGGGCCGGATGCGATTGCACGCGCCTTCGTCAGCGATTTCGCCAATCTGTCGGCGGCGCTGTGGACCACCTTGCGCATCACCATCGTCGCATTCGTTCTGGCGGTGGTGGGCGGTGTGGCGCTGGCGGTGCTGTTCAGCCAGAGCCGCATCATCGAAACCGCACTGTTTCCCTATGCGGTGATCTTGCAGGTGACGCCAGTGGTGGCGATAGCGCCGATCGTGACCATCTGGGTCGGTTACGACAACATCAACGCGGTACTGTTGATCCTGGCCTGGATCGTGGCGTTCTTTCCCATTCTGGCCAACACCACACTGGGCCTGCGCTCCGCCGATCACAATCTGATCGACCTGTTCCGGCTTTATGGCGCCAGCCGCTGGCAGATTTTGTGGAAGCTGCGCTTTCCCTCCGCCTTGCCCTATCTCCTCAGCGCGATGAAGGTTTCGGGCGGGCTGGCGCTGATCGGCGTGGTGGTGGCGGAATTCGCCGCCGGCACCGGCACGGCCACTGGGCTTGCCTGGCTGATCACCTTGGCGACGCGCAATCTGCACATGGCAACCGCGTTTGCGGCGCTGGTGCTGCTGTCCATCCTCGGTATCGTGATTTTCTTCGCGCTGTCGGCACTGGAATGGGCGCTGCTGCACCGCTGGCACGAAAGCGCAATCGCGAAAGAAGGCTGA
PROTEIN sequence
Length: 262
LNTVLKIAIPVGLGIAVIAAWQWAVTALAISPIVLPGPDAIARAFVSDFANLSAALWTTLRITIVAFVLAVVGGVALAVLFSQSRIIETALFPYAVILQVTPVVAIAPIVTIWVGYDNINAVLLILAWIVAFFPILANTTLGLRSADHNLIDLFRLYGASRWQILWKLRFPSALPYLLSAMKVSGGLALIGVVVAEFAAGTGTATGLAWLITLATRNLHMATAFAALVLLSILGIVIFFALSALEWALLHRWHESAIAKEG*