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SCN18_13_7_16_R1_B_scaffold_176_5

Organism: SCN18_13_7_16_R1_B_Burkholderiales_69_20

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5292..6305)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-E factor negative regulatory protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5R5_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 336.0
  • Bit_score: 318
  • Evalue 4.20e-84
Sigma-E factor negative regulatory protein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 336.0
  • Bit_score: 318
  • Evalue 1.20e-84
Sigma-E factor negative regulatory protein-like protein {ECO:0000313|EMBL:AEG93949.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 336.0
  • Bit_score: 318
  • Evalue 5.80e-84

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAGCGCCCTGGCGCTGTTGTGGTGCGCCGGCGGCGTGCTGAGCTGTGCTGCCGCGCAGGGGGCGTTCGGCGGCGGTGCGGGCCGACCCGTGGGGCCGCCGCAGCGCAGCGTCGACGAGTGGCTGGTGCGCCTGCAGCAGGGCTCCAGCGTGCCGTCGTTTGTCGGCACCTACGTGGTCAGCGCGTCCAACGGCGCTATGGCCAGTGCGCGCATCTGGCATTTGTGCGAGGGCGACGTGCAGTTCGAGCGCGTCGACGCGCTGTCGGGCCCGCCGCGCTCGACCTTCCGGCGCAACGACGAGGTCAGCCTGCTGCTGCCTGATGCCCATGTGCTGCGTTCCGAGCAGCGCGCGCCCGGCGGGCGCTTTCCCAACCTGCTGCGCCCGGGTGCCGATCAGGCCGCGGCCGAGCACTACACGGCCCAGGAGACGGGCCAGGATCGCGTGGCCGGCATGACCACCGACGTGGTGGTGCTCAAGCCGGTCGATCAATGGCGCTTCGGCTACCGCATCTGGAGCGAGCGCCGCACGGGCCTGGTGCTCAAGACGCAGACGCTGGACGGCGCCGGCAAGGTGCTGGAGCAGTCGGCGTTTTCCGAGGTACAGCTCGATCCGCCCGAGCCGGCCGTCAAGACCCAGCTGGCCATGCCCAGCACCGAGGGCTGGCGCAAGGTGCGCATCGAGCGCGTGCGCATCGACGCTGCGCGCGAGGGCTGGCGCCTGGAGCAGCCGGTGCCGGGCTTCGAGCCGCAGGGCTGCTTTCGGCAGTCCATGGGGGCGTCGAACTCGGTCGTGCAATGGGTGTTTTCGGACGGCCTGGCCACGGTGTCGATATTCATCGAGCCCTTCGACGCCAAGCGCCACGTGCATGCCGGGGTGTCCAGCCTGGGCGCCACGCATGCCATGAGCCGCCGCTGGCCCGGCGCCGAAGGGCCCTGGTGGGTCACCCTGATCGGCGAGGTGCCGCGCCAGACCCTGACCGCCCTGCTCGACAATCTGCGCCACGACAAGTGA
PROTEIN sequence
Length: 338
MSALALLWCAGGVLSCAAAQGAFGGGAGRPVGPPQRSVDEWLVRLQQGSSVPSFVGTYVVSASNGAMASARIWHLCEGDVQFERVDALSGPPRSTFRRNDEVSLLLPDAHVLRSEQRAPGGRFPNLLRPGADQAAAEHYTAQETGQDRVAGMTTDVVVLKPVDQWRFGYRIWSERRTGLVLKTQTLDGAGKVLEQSAFSEVQLDPPEPAVKTQLAMPSTEGWRKVRIERVRIDAAREGWRLEQPVPGFEPQGCFRQSMGASNSVVQWVFSDGLATVSIFIEPFDAKRHVHAGVSSLGATHAMSRRWPGAEGPWWVTLIGEVPRQTLTALLDNLRHDK*