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SCN18_13_7_16_R1_B_scaffold_574_22

Organism: SCN18_13_7_16_R1_B_Burkholderiales_69_20

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20173..20766)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein, SmpA/OmlA family n=1 Tax=Variovorax paradoxus B4 RepID=T1X649_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 191.0
  • Bit_score: 203
  • Evalue 1.90e-49
putative lipoprotein, SmpA/OmlA family similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 191.0
  • Bit_score: 203
  • Evalue 5.50e-50
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 191.0
  • Bit_score: 203
  • Evalue 2.70e-49

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGCCCGGTCGTATCGTGCCCAAGCCCCCGTCGATGCCCCAGATGCCCCGCCCCCCCGTCCGCCACGCCGGCCGGGTGACGCTCGCCCTGTGCGTGGCCGCGCTCGTCGGCGCCTGCAGCTCGTTCAACGACGCCACGCGCGACATGGCCAACGCCATCACGCTGTACAAGCCCGAGGTGGTGCAGGGCAATTTCGTCTCCAAGGAGCAGGTGGCCCAGCTGCAGCCGGGCATGACGCGCCTGCAGGTGCGCGACCTGCTGGGCACGCCGCTGATGACCAGCCTGTTCCACAACGACCGCTGGGACTACGTGTTCACCATCGCGCGCCAGGGCGTCAAGCCGCAGCAGTACCGCCTGACCCTGTTCTTCAACGGCGACGCGCTCGACCACTTCGAGGGCGACGAAATGCCCAGCGAAAACGAGTTCGTGCAGCGCATCGGCCGCGACAAGACCTACAAGGTGCCGCCGCTGGAGGCCACCGAGGAGCAGCTCGCCAAGTTCCCGGCGCCCGGCGCCTCGGCCGCCGCGGCGGCCACCGCGCCCACCCCCGAGCCGCCGGCCGGCGGCTACCCCCCGCTCGACAGCCCGCGCTGA
PROTEIN sequence
Length: 198
MPGRIVPKPPSMPQMPRPPVRHAGRVTLALCVAALVGACSSFNDATRDMANAITLYKPEVVQGNFVSKEQVAQLQPGMTRLQVRDLLGTPLMTSLFHNDRWDYVFTIARQGVKPQQYRLTLFFNGDALDHFEGDEMPSENEFVQRIGRDKTYKVPPLEATEEQLAKFPAPGASAAAAATAPTPEPPAGGYPPLDSPR*