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SCN18_13_7_16_R1_B_scaffold_585_26

Organism: SCN18_13_7_16_R1_B_Burkholderiales_69_20

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 22311..23858

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVE0_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 526.0
  • Bit_score: 614
  • Evalue 7.30e-173
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 546.0
  • Bit_score: 615
  • Evalue 3.50e-173
RNA polymerase sigma-54 factor, rpon similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 526.0
  • Bit_score: 614
  • Evalue 2.10e-173

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Taxonomy

SCN_Comamonadaceae_20x → SCN_Comamonadaceae_20x → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
GTGAAACCCGGGCTTTCCCTTCGCGTTTCGCAGCAACTGGCGCTGACGCCGCAGCTGCAGCAGTCGATCCGCCTGCTGCAGCTGTCCACGCTGGAGCTGGCCAGCGAAGTCGAGCAGATGCTGCTGGACAACCCCTTCCTGGAGCGCGAGGACGAACACGCCGACGCCGAGCCCCCCGAGCCCGCGCGCGAGCCGCGCGAGCGCGAGGCCGCCGACTCCCGAGACGCTATCGATTCGGAAGCTGCTGGCGCTGATTCGACGGGCGCTGAAGCCGAATTCGATTCCAAACAGGACTGGCCGGACGACTGGGAGGGCGATGGCGCCGACGCGCCCAGCGACCGCGAATGGGGCGACGCTGCCGGCCCCGGCGCGAGCGGCGACGAGCGCGAGCCGGGCGAGCGCGACGCGCCGCACGAGTCGCTGGCCGCCCACCTGCACACCCAGATGCTGGCGCTGCGGCTGGCGCCCGAAGACGCGGCGGTACTGCGCTTTCTGATCGAGTCGCTGAACGAAGACGGCTACCTGGAGGACTCGCTGGCCCAGCTGGCCGCCACCCTGGTGGACGACAGCGACGAGCTGGACGCGCTCGACACCCTGGTGCACCGCTTCAGCTTCGCGCTCAAGCTGCTGCAGTCGATGGAGCCGGCCGGCGTGGGTGCGCGCGACTTGCCCGAGTGCCTGGCGCTGCAGCTCAAGGCGCTGTTGGCCGACGCCGCGCTGCCGCCCGCCACCCAGGCCAGCGCCCGCGCCGCGCTGGCCCTGCTGGCCCAGCCCCAGGCGCTGGACGCGCTGGCCCGCCGCGACCTGCGCCGCCTGGCGCAGGCCAGCGGCCAGGACGAGGCCGCGGTGCGCGCCGCCATGGCCCTAATCGCCACGCTGGAGCCCAAGCCCGGCCGGCGCTTTGCCGATGTCGAGCACAACGTCATCGTGCCCGACGTCATCGTCTCGGCCAGTGGCACGAGCCAGCGCCTGCGCGTGCAGCTCAACCCCGAGGTGCTGCCGCGCCTGCGCGTGCACGACCTGTACGCGCGCGCCCTGCGCGGCGGCAAGGAGGGCGGCGGCCACGCGGCGCTGAGCCAGCAGCTGCAGGAGGCGCGCTGGTTCATCCGCAACATCCAGCAGCGCTTCGACACCATCCTGCGCGTGAGCGAGGCCATCGTGCAGCGCCAGCGCAGCTTCTTCACCCACGGCGAGCTGGCCATGCGCCCGCTGGTGCAGCGCGAGCTGGCCGAGGCGCTGGGCGTGCACGAATCGACCATCTCGCGCGTGACCACCGCCAAGTACATGGCCACGCCGCGCGGCACCTTCGAGCTGAAGTACTTCTTCGGCTCGGCACTGGGCACCGAGGCCGGCGGCAACGCCAGCAGCACCGCGGTGCGCGCGCTGATCAAGCAGTTCATCGCCGCCGAAGACCCGCGCCGCCCGCTGTCCGACCAGCGGCTGGCCGAGATGCTGAAGGAGCAGGGCATCGACTGCGCGCGCCGCACCGTGGCCAAGTACCGCGAGGCGATGAAGATCGCCCCCACCCCGCTGCGCAAGCAGCTCTAG
PROTEIN sequence
Length: 516
VKPGLSLRVSQQLALTPQLQQSIRLLQLSTLELASEVEQMLLDNPFLEREDEHADAEPPEPAREPREREAADSRDAIDSEAAGADSTGAEAEFDSKQDWPDDWEGDGADAPSDREWGDAAGPGASGDEREPGERDAPHESLAAHLHTQMLALRLAPEDAAVLRFLIESLNEDGYLEDSLAQLAATLVDDSDELDALDTLVHRFSFALKLLQSMEPAGVGARDLPECLALQLKALLADAALPPATQASARAALALLAQPQALDALARRDLRRLAQASGQDEAAVRAAMALIATLEPKPGRRFADVEHNVIVPDVIVSASGTSQRLRVQLNPEVLPRLRVHDLYARALRGGKEGGGHAALSQQLQEARWFIRNIQQRFDTILRVSEAIVQRQRSFFTHGELAMRPLVQRELAEALGVHESTISRVTTAKYMATPRGTFELKYFFGSALGTEAGGNASSTAVRALIKQFIAAEDPRRPLSDQRLAEMLKEQGIDCARRTVAKYREAMKIAPTPLRKQL*