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SCN18_13_7_16_R1_B_scaffold_585_30

Organism: SCN18_13_7_16_R1_B_Burkholderiales_69_20

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 26646..27812

Top 3 Functional Annotations

Value Algorithm Source
carnitine dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI00037BE3F7 similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 384.0
  • Bit_score: 600
  • Evalue 8.20e-169
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 381.0
  • Bit_score: 584
  • Evalue 1.30e-164
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ABM58966.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 381.0
  • Bit_score: 584
  • Evalue 6.60e-164

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGACGGGCGTGCTTGACGGGGTTCGCGTGCTGGAGCTGGGCCAGGTGCTGGCCGGGCCGTTTGCCGGCGCCATCCTGGCCGACCTGGGCGCCGAGGTGGTGAAGGTGGAGCGCGTGCAGGGCGGCGACGACGCACGCCAGATGGGGCCGGCGTTTCGGCATGGCGACGCGCTGAACTTCCAGGTCTTCAACCGCGGCAAGCAGTCGGTGGCGCTGGACCTGAAAAGCCCCGAGGGCCTGGCCGCCTTCGAACGGTTGGCCGGCGAGGCCGACATCTTCATCCACAACCTGCGCCCCGGCGTGCCGGCCAAGCTGGGCATCGACGGCGCGACGCTGTGCGCGCGCCATCCGCGCCTGATCTACTGCGAGATCTCGGCCTTCGGCCATGTGGGGCCGATGGCGCTGCAGCCGGGTTACGAGCCGCTGGTGCAGGCCTTCAGCGGCCTGTCCAGCACCAATGGCGGACCCGATGATCCGCCGATGCGCTCGGCCGCCTCGATGTGCGACCAGGGCAGCGGCATGTGGGTGGTGATCGGCGCGCTGGCCCTGCTGCACCGGCGCGCGCAGACCGGGCGCGGCGGCATCCTGAACACCTCGCTGCTGGAAACCGCGCTGGTCTGGAACGGCCAGAAGGCCGACGCCTTTGTCAACGAAGGCCGCCTGCCGAAGCGCGATCGCTCGGGCCACCCCGGCTTCGTGCCCTACGAAGCCTTCGACACGCAGGACGCGCCGCTGCTCATCTGCTGCGGCAACGACCGCCTGTTCGCCAAGCTGGCCGCCGAGCTGGGCCGCAGCGACTGGCTCGTGGACGAACGCTTTGCCACCAACCGCGCGCGCCTGGCGCACAAGGCGGCGCTGCTGGAACAACTGGTGCCGCTGCTGTGCGCGCAGCCGCGCGCCGAGTGGATCGAGCGCTTCGACGCCGCCGGCGTGCCCTGCGCGCCGATCCACACCGTGCCCGAGGCGCTGGCCCACCCGCAGGTGCGGGCGCTCGGCATCCTGGCGCCGCTGCCGGGCGAGGATTTTTCGCTCACCGCCCTGCCGCTCAGCATCGACGGCCAGCGCCCCCTGCCGCGTGCCGGCGCGCCTCGCCTGGGCGCCGGCAACGCCGCGCACGGCCTGCCCGTGCCCCCCCGATCACCCACCACCCTTCAGGAGACACCTTGA
PROTEIN sequence
Length: 389
MTGVLDGVRVLELGQVLAGPFAGAILADLGAEVVKVERVQGGDDARQMGPAFRHGDALNFQVFNRGKQSVALDLKSPEGLAAFERLAGEADIFIHNLRPGVPAKLGIDGATLCARHPRLIYCEISAFGHVGPMALQPGYEPLVQAFSGLSSTNGGPDDPPMRSAASMCDQGSGMWVVIGALALLHRRAQTGRGGILNTSLLETALVWNGQKADAFVNEGRLPKRDRSGHPGFVPYEAFDTQDAPLLICCGNDRLFAKLAAELGRSDWLVDERFATNRARLAHKAALLEQLVPLLCAQPRAEWIERFDAAGVPCAPIHTVPEALAHPQVRALGILAPLPGEDFSLTALPLSIDGQRPLPRAGAPRLGAGNAAHGLPVPPRSPTTLQETP*