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SCN18_13_7_16_R1_B_scaffold_1735_2

Organism: SCN18_13_7_16_R1_B_Burkholderiales_69_20

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3532..7644)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 1369.0
  • Bit_score: 2500
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 1369.0
  • Bit_score: 2500
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Acidovorax sp. (strain JS42) RepID=RPOB_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 1369.0
  • Bit_score: 2500
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Acidovorax_64_34 → SCNpilot_P_inoc_Acidovorax_64_34 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4113
ATGGCCTATACCTTCACCGAACGCAAGCGCATCCGCAAGAGCTTTGGCAGCCGCGACAGCGTGCTCGAGGTTCCGTACCTGCTGCAGATGCAGCGCGACGCCTACACCGCCTTCCTGCAAGCCGACTCCGCGCCCAAGAAGCGCACCCACGAGGGTCTGCAGGCCGCGTTCGAGTCCGCCTTCCCCATCGTCTCGCACAACGGCTTTGTCGAGATGAAGTTCATCGAATACAACCTGGCCAAGCCGGCCTTCGACGTGCGCGAGTGCCAGACGCGCGGCCTGACCTTCGCCTCGGCCGTGCGCGCGCGCGTGCAGCTCATCATCTACGACCGCGAGTCCTCCACCTCGCAGTCCAAGGTGGTCAAGGAAGTGAAGGAGCAGGAGGTCTACATGGGCGAGGTGCCCCTGATGACCGACAAGGGCTCGTTCATCGTCAACGGCACCGAGCGCGTGATCGTCAGCCAGCTGCACCGCTCGCCCGGCGTGTTTTTCGAGCACGACAAGGGCAAGACGCACAGCTCGGGCAAGCTGCTGTTCTCGGCGCGCATCATTCCCTATCGCGGCTCGTGGCTGGACTTCGAGTTCGACCCCAAGGACATCCTGTTCTTCCGCGTCGACCGCCGCCGCAAGATGCCGGTCACCATCCTGCTGAAGGCCATCGGCCTGACGCCGGAACAGATCCTGGCGAACTTCTTCGTCAACGACAACTTCCGCCTGATGGACAGCGGCGCGCAGATGGAGTTCGTGTCCGAGCGCCTGAAGGGCGAGGTGGCGCGTTTCGACATCACCGACAAGTCGGGCAAGGTCATCGTCGCCAAGGACAAGCGCGTCACCGCGCGCCACACGCGCGAGCTGGAGCAGTCGGGCACCACGCACATCAGCGTGCCCGAGGACTTCCTGCTGGGCCGCGTGGTGGCCAAGAACATCGTCGACGGCGATACCGGCGAGATCGTGGCCAAGGCCAACGAGGAGCTGACCGAGGGCCTGCTGAAAAAGCTGCGCGAGGCGGGCGTGCAGGAGCTGCCCTGCATCTTCACCAACGAGCTCGACCAGGGCGCCTACATCTCGCAGACGCTGCGCGCCGACGAGACCGCCGACGAGTTCGCCGCCCGCGTGGCCATCTACCGCATGATGCGCCCCGGCGAGCCGCCCACCGAGGACGCGGTGCAGGCCCTGTTCCAGCGCCTGTTCTACAACCCCGACACCTACGACCTGTCGCGCGTGGGCCGCATGAAGTTCAACGCCAAGGTCGGTCGCGAGGAGTCGACCGGCCCGATGGTGCTGTCCAACGACGACATCCTGGCCGTGGTCAAGATCCTGGTCGAGCTGCGCAACGGTCGTGGCGAGGTCGATGACATCGACCACCTGGGCAACCGCCGCGTGCGCTGCGTGGGTGAGCTGGCCGAAAACCAGTACCGCATGGGCCTGGCGCGCATCGAGAAGGCCGTGAAGGAGCGCCTGGGCCAGGCCGAGCAGGAGCCCTTGATGCCGCACGACCTGATCAACAGCAAGCCGATTTCGGCCGCGCTCAAGGAGTTCTTCGGCGCCTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGGCCGAAATCACGCACAAGCGCCGCGTGTCGGCCCTGGGCCCGGGCGGCCTGACGCGCGAGCGCGCGGGCTTCGAGGTGCGCGACGTGCACGTCACGCACTACGGCCGCGTGTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCCCTGTACGCGCGCCTGAACGAGTACGGCTTTATCGAGACACCGTACCGCCGCGTGGTCGACGGCAAGGTGACGATGGACATCGACTACCTGTCGGCCATCGAGGAAGGCAAGTACATCATCGCGCAGGCCAACGCCACGCTGGACAAGGACGGGCGCCTCACGGGCGACCTGGTGTCGGCGCGCGAGAAGGGCGACTCGGTGCTGGTGGGCGCCGAGCGCATCCAGTACATGGACGTGTCGCCGGCGCAGATCGTGTCGGTGGCGGCTTCGCTGGTGCCTTTCCTGGAGCACGACGACGCCAACCGCGCGCTGATGGGCGCCAACATGTCGCGCCAGGCGGTGCCCGTGCTGCGGCCCGAGAAACCCCTGGTCGGCACCGGCATCGAGCGCGTGGCCGCGGTCGACTCGGGCACCGTGGTGACGGCGCGCCGTGGCGGCGTGGTGGACTACGTCGACGCCACGCGCATCGTGATCCGCGTCAACGACGACGAGGCGGTGGCCGGTGAAGTGGGCGTGGACATCTACAACCTGATCAAGTACCAGCGCAGCAACCAGAACACCAACATCCACCAGCGCCCGATCGTCAAGCGCGGCGACAAGCTGGCCAAGGGCGACGTGGTGGCCGACGGCGCCTCGACCGACCTGGGCGAGATCGCCATCGGCCAGAACATGCTGATCGCCTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCAGCGAGCGCGTGGTGGCCGAAGACCGCTACACCAGTATCCACATCGAGGAGCTGGTGGTGATGGCGCGCGACACCAAGCTGGGCGCCGAAGAGATCACGCGCGACATTCCCAATCTGTCGGAGCAGCAGCTGAATCGCCTGGACGAGTCCGGCATCATCTATGTGGGCGCCGAGGTGCTGCCCGGCGACACGCTGGTCGGCAAGGTCACGCCCAAGGGCGAAACCACGCTGACGCCCGAAGAAAAGCTGCTGCGCGCCATCTTCGGCGAGAAGGCCAGCGACGTGAAGGACACCTCGCTGCGCGTGGACCAGGGCTCGCAGGGCACGGTGATCGACGTGCAGGTGTTCACCCGCGAAGGCATCCAGCGCGACAAGCGCGCGCAGCAGATCATCGACGATGAGCTGAAGCGCTACCGGCTGGACTTGAACGACCAGCTGCGCATCGTCGAGGCCGACGCCTTCGACCGCATCGAGAAGCTGCTGATCGGCAAGCTGGCCAACGGCGGCCCCAACCGCATCGCCAAGGGCACCAAGATCGACAAGGCCTACCTGGCCTCGGTCGACAAGTACCACTGGTTCGACATCCGTCCGGCCGACGACGGCGTGGCCGCGCAGGTCGAGAGCATCAAGGCCTCGATCGAGCAGCAGCGCCACAGCTTCGACCTCGCCTTCGAGGAAAAGCGCAAGAAGCTGACGCAGGGCGACGAGCTGCCGGCCGGCGTGCTGAAGATGGTCAAGGTCTACCTGGCCGTCAAGCGCCGCCTGCAGCCCGGTGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTGTCCAAGATCGTGCCGATCGAGGACATGCCCTACATGGCCGACGGCACGCCCGCCGACATCGTGCTGAACCCGCTGGGCGTGCCCTCGCGCATGAACGTGGGCCAGGTGCTGGAAGTGCACCTGGGCTGGGCCGGCAAGGGCATCGGCGCGCGCATCAACGAGATGCTGGCGGCCGAGAACCGCGTCGCCAAGCTGCGCCAGTATCTGGAGCAGCTCTACAACAGCACGGGCCGCAAGGAGGACTTCAAGTCCATCGGCGACGATCAGCTGCTGGAGATGGCCGAGAACCTGACCGGCGGCGTGCCCTTTGCCACGCCGGTGTTCGACGGCGCCACCGAAGAAGACATCCACGCCATGCTCAAGCTGGCCTACCCCGAGGAGGTGGCCAAGCTCAAGGGCCTCACGGCCACGCGCACGCAGGCCTGGCTGCACGACGGCCGCACCGGCGACGCCTTCGAGCGCCCGACCACCGTGGGCTACATGCACTTCCTGAAGCTGCACCACCTGGTCGACGACAAGATGCACGCGCGCTCGACCGGACCGTACTCGCTGGTGACGCAGCAGCCGCTGGGCGGCAAGGCCCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAGGTGTGGGCGCTGGAGGCCTATGGCGCCGCCTACACGCTGCAAGAGATGCTCACCGTCAAGTCCGACGACGTGCAGGGCCGCACCAAGGTGTACGAGTCCATCGTCAAGGGCGAGCACTCCATCGACGCCGGCATGCCCGAGTCGTTCAACGTGCTGGTCAAGGAAATTCGCTCGCTCGGCCTCGACATCGAGTTGGAGCGCTCTTAA
PROTEIN sequence
Length: 1371
MAYTFTERKRIRKSFGSRDSVLEVPYLLQMQRDAYTAFLQADSAPKKRTHEGLQAAFESAFPIVSHNGFVEMKFIEYNLAKPAFDVRECQTRGLTFASAVRARVQLIIYDRESSTSQSKVVKEVKEQEVYMGEVPLMTDKGSFIVNGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDILFFRVDRRRKMPVTILLKAIGLTPEQILANFFVNDNFRLMDSGAQMEFVSERLKGEVARFDITDKSGKVIVAKDKRVTARHTRELEQSGTTHISVPEDFLLGRVVAKNIVDGDTGEIVAKANEELTEGLLKKLREAGVQELPCIFTNELDQGAYISQTLRADETADEFAARVAIYRMMRPGEPPTEDAVQALFQRLFYNPDTYDLSRVGRMKFNAKVGREESTGPMVLSNDDILAVVKILVELRNGRGEVDDIDHLGNRRVRCVGELAENQYRMGLARIEKAVKERLGQAEQEPLMPHDLINSKPISAALKEFFGASQLSQFMDQTNPLAEITHKRRVSALGPGGLTRERAGFEVRDVHVTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFIETPYRRVVDGKVTMDIDYLSAIEEGKYIIAQANATLDKDGRLTGDLVSAREKGDSVLVGAERIQYMDVSPAQIVSVAASLVPFLEHDDANRALMGANMSRQAVPVLRPEKPLVGTGIERVAAVDSGTVVTARRGGVVDYVDATRIVIRVNDDEAVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVKRGDKLAKGDVVADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILISERVVAEDRYTSIHIEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDESGIIYVGAEVLPGDTLVGKVTPKGETTLTPEEKLLRAIFGEKASDVKDTSLRVDQGSQGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEADAFDRIEKLLIGKLANGGPNRIAKGTKIDKAYLASVDKYHWFDIRPADDGVAAQVESIKASIEQQRHSFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPIEDMPYMADGTPADIVLNPLGVPSRMNVGQVLEVHLGWAGKGIGARINEMLAAENRVAKLRQYLEQLYNSTGRKEDFKSIGDDQLLEMAENLTGGVPFATPVFDGATEEDIHAMLKLAYPEEVAKLKGLTATRTQAWLHDGRTGDAFERPTTVGYMHFLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRTKVYESIVKGEHSIDAGMPESFNVLVKEIRSLGLDIELERS*