ggKbase home page

SCN18_13_7_16_R1_B_scaffold_78_8

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(6754..7332)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae LMG 25863.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 190.0
  • Bit_score: 287
  • Evalue 1.40e-74
Uncharacterized protein n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0E7J5_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 190.0
  • Bit_score: 287
  • Evalue 1.00e-74
16S rRNA m(2)G-966 methyltransferase similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 190.0
  • Bit_score: 286
  • Evalue 4.80e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGCGCATCATCGGCGGGCGCTGGCGCAATACGCGGCTGCCGGTGCCGTACGCCGAAGGGCTGCGTCCGACCAGCGACCGCGTGCGCGAGACCCTGTTCAACTGGCTGATGCCGAAGTTGCCGGGCGCGCGCGTGCTGGACCTGTTCGCCGGCAGCGGCGCGCTGGGGCTGGAGGCGGTCTCGCGCGGCGCGGCGGCGGCGCAGCTGGTCGAGCGCGATCCGGCGCTGGTGGCTGCCCTGCGCGATGTGGTCGGGCGCCTGGATGCCGCTGCGCAGGTGCAGGTCGCCGCCGGCGACGCATTGCGCTGGCTGGAAACCGCTCCGGCGCAGCAGGCCGACATCGTGTTCGTCGATCCGCCATTCGCCGACGGCATGTGGGCGCAGGTGTTCGAACGGTTGCCGCGGCACCTGGCCGCCGATGCATGGTTGTACGTGGAGGCGCCGGCGGGCGCGGCGCCGCGTGTGCCCGCCGGCTGGAGCCTGCACCGCGAGGGCGGCACCCGCGATGTGGGCTATGCCCTGTACCGTCGCGCCGCTGCTACACTCCGCGATGACCTGAACGCGACCCCGTCCGCATGA
PROTEIN sequence
Length: 193
VRIIGGRWRNTRLPVPYAEGLRPTSDRVRETLFNWLMPKLPGARVLDLFAGSGALGLEAVSRGAAAAQLVERDPALVAALRDVVGRLDAAAQVQVAAGDALRWLETAPAQQADIVFVDPPFADGMWAQVFERLPRHLAADAWLYVEAPAGAAPRVPAGWSLHREGGTRDVGYALYRRAAATLRDDLNATPSA*