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SCN18_13_7_16_R1_B_scaffold_78_16

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(14279..15547)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein-releasing system transmembrane protein lolC n=3 Tax=Stenotrophomonas maltophilia RepID=J7V334_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 413.0
  • Bit_score: 684
  • Evalue 6.20e-194
Stenotrophomonas maltophilia strain ZBG7B contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85899.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 413.0
  • Bit_score: 686
  • Evalue 1.30e-194
lipoprotein releasing system transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 413.0
  • Bit_score: 684
  • Evalue 1.70e-194

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1269
ATGGCGCCACTCCACCGGCACACGCGCATGTTCAGACCCTTACCCGTCGCAATCGGATTGCGTTACCTGCGGGCCAAGCGCCGCAACGGTTTCATCTCCTTCATTTCCATGGCATCGATCCTGGGCATCGCGCTCGGGGTGACGGTGCTGATCACCACGCTGGCGGTGATGAGCGGTTTCCAGAAGGAAATCCGCGACCGCCTGCTGCAGATGTCGGCCCACGCGACTGTCAGCGCCGATGGGGAGCCGATGGGCAACTGGCAGCACGCGGTGGACGTAGCCATGCGCGACCCGCGCGTGGCCGGCGCCGCGCCCTACATCGAGATCCAGGGCATGCTGGCGGGGCCGCGCGTGCAGGGAGCGATCGTGCAGGGCGTCGATCCGGCGCTGGAGCCGAAGGTGTCGGTGCTGGGCGAGAAGATGCAGAAGGGCTCGCTGGACAGCCTGCAACCGGGTGAATTCAACATCCTTCTCGGCAAGGAACTGGCGGTATGGCTGGGCGTGGACGTGGGCGACAGCGTGGTGGCGACGCTGGCCGAGATCCAGGGCACCCCGGTCGGCGCGATGGCGCGGACCAAGCGCTTCAAGGTCAGCGGCATCTTCGAGGCCGGCTCCAACGAAGTCGATCGTGGCGTGGCCTTCGTCAACATGCAGGACCTGGAGCGGGTGCTGCGGGTGGACGGGGTGACCGGCGTGCGCCTGAAGCTGCACGACATGGACCAGGCCTATACCGTGGCGCGCGACCTGGCACTTAACCTGGAAGGCTATTACCGGGTCAGCGACTGGACCCAAGAGAACGCCAACCTTTACCACTCGCTGCGCATGGAAAAGACGGTGATGGGCATCCTGCTGTCGCTGATCGTGGCCATGGGCGCGTTCAACCTGGTGTCCTCGCAGGTGATGCTGGTCACCGACAAGCAGGCCGACATCGCCATCCTGCGCACGCTCGGGTTGACGCCGGGCGGAGTGATGCAGGTGTTCATGGTGCAGGGCAGCCTGATCGGGCTGATGGGCACGGTGGCTGGCGTGATCGGCGGCATCAGCCTGACGCTCAACCTCGAGCGCATCCTCGGCCTGATCGAGTCGGCCTTCGACATCAAACTGCTGCCGGAGGACGTGTACTACATCACCGGCCTGCCGACCGACATGCAGACCGGCGATATCGTGGTGATCACCGCGGTGGCGCTGCTGATGAGTTTCCTGGCAACGCTGTATCCGGCCTGGCGCGCGGCGCGCACCCAGCCGGCGGAGGCGCTGCGCTATGAGTGA
PROTEIN sequence
Length: 423
MAPLHRHTRMFRPLPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLLQMSAHATVSADGEPMGNWQHAVDVAMRDPRVAGAAPYIEIQGMLAGPRVQGAIVQGVDPALEPKVSVLGEKMQKGSLDSLQPGEFNILLGKELAVWLGVDVGDSVVATLAEIQGTPVGAMARTKRFKVSGIFEAGSNEVDRGVAFVNMQDLERVLRVDGVTGVRLKLHDMDQAYTVARDLALNLEGYYRVSDWTQENANLYHSLRMEKTVMGILLSLIVAMGAFNLVSSQVMLVTDKQADIAILRTLGLTPGGVMQVFMVQGSLIGLMGTVAGVIGGISLTLNLERILGLIESAFDIKLLPEDVYYITGLPTDMQTGDIVVITAVALLMSFLATLYPAWRAARTQPAEALRYE*