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SCN18_13_7_16_R1_B_scaffold_78_17

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(15565..15993)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B15A similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 140.0
  • Bit_score: 119
  • Evalue 2.00e-24
membrane protein similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 132.0
  • Bit_score: 116
  • Evalue 3.70e-24
Membrane protein {ECO:0000313|EMBL:AJC48114.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 132.0
  • Bit_score: 116
  • Evalue 1.90e-23

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGCGCAGCAGGCTACCCTGCTGGAGTACATCCGCTCCCTTCCGCTGTGAGTGGCGGCCTTCGCGCTGGCAGGCCGGCGCCCTGCTGCTGCTCGGCCTGCTGGCCGCCGTCGCGCTGCTGAACTGCGAGCTGGAAGATACGATCGCCTGGCCGGCCGCGCTGCTGGTCTCCTGCTGGGGGCTGCGCGCGGCGCGGCACGGATTGGGCCAGCCGGCCCGGCAGCTGTTGGTTCCGCCGGCGCCGGCCCCGGCCAGCGTCGATGGCATGGCGGTCGACGCGCTGGAGCTGCTGGAACGCGACCCGCTGCTGGTGCTGCGCTGGCGCAAGGGGAAGCGGCGCGGGCAACTGCTGTTCTGGCCGGACACGCTGCCACGCGCACGGCGACGTGAACTGCGACTGGCCGTGCGCGCCAGCGCCGTTTCCCGTTAG
PROTEIN sequence
Length: 143
MRSRLPCWSTSAPFRCEWRPSRWQAGALLLLGLLAAVALLNCELEDTIAWPAALLVSCWGLRAARHGLGQPARQLLVPPAPAPASVDGMAVDALELLERDPLLVLRWRKGKRRGQLLFWPDTLPRARRRELRLAVRASAVSR*