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SCN18_13_7_16_R1_B_scaffold_229_27

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(29266..30165)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F228 similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 294.0
  • Bit_score: 413
  • Evalue 1.40e-112
LysR-family transcriptional regulator {ECO:0000313|EMBL:KFL45388.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 298.0
  • Bit_score: 409
  • Evalue 2.90e-111
Putative HTH-type transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 298.0
  • Bit_score: 407
  • Evalue 2.20e-111

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGACCGCATCGAGCTGTGCCGCATCTTCGTCCGCGTGGTGGACTGCGCCGGCTTCACCCGCGCCGCCGACCAGCTGAACCTGCCGCGCTCCACTGTTTCCGAGGCGGTCCGCACGCTGGAGCAGCGGCTGGGCACGCGCCTGCTCCATCGCACCACCCGCCAGGTCACCCCGACCCAGGACGGGCTGCTGTTCCACGCCCGCTGCCAGCAGCTGATCGCCGACATGGACGAGGCCGAGCAGCTGTTCCGGCAGGCGCCGCATGCGCTGAGCGGCCGCCTGCGGGTGGACGTGCCCGGCCGCATCGGCCGCCTGATCCTGGCGCCGGCGCTGCCGCGCTTCCTCGACGCGCACCCGGGGATCGACGTCGAGCTGGGCATGACCGACCGCACCGTCGATCTGGTCGAGGATGGCGTGGACTGCGCACTGCGGGTCGGCCCGCTGCAGGATTCGCGGCTGGTGGCGCGCGGCCTCGGCCAGCTGCCGCTGGTCAACGTGGCCAGCGCCGGATACCTCGCCGCGCACGGCATCCCCGCCCATCCCCGACAACTGCCCGACCATTGGGGCGTGCGCTACGCCTCGCCCGGCAACGGCCGGGTCGAACCCTGGGAGTGGCGCGAGGAAGGCGTGCTGCACGAACAGCCGCTGCGCGGGCGCGTCACCGTCAACAGCGCCGAGGCCTACATCGCCTGCTGCATCGCAGGGATGGGCCTGATCCAGATTCCGGCATACGACGTACGCCGCGAACTGGCCGACGGCACCCTGGTCGAAGTGATGCCCGGCCATCGCGCCGACCCGCTGCCGATGCACCTGCTGTATCCGCACCGGCGGCACCCGTCGCAGCGGCTGCAGGTGTTCGTGGCCTGGTTGCAGGAGGTGCTGGGCGAAGCCGTCCGGTAG
PROTEIN sequence
Length: 300
MDRIELCRIFVRVVDCAGFTRAADQLNLPRSTVSEAVRTLEQRLGTRLLHRTTRQVTPTQDGLLFHARCQQLIADMDEAEQLFRQAPHALSGRLRVDVPGRIGRLILAPALPRFLDAHPGIDVELGMTDRTVDLVEDGVDCALRVGPLQDSRLVARGLGQLPLVNVASAGYLAAHGIPAHPRQLPDHWGVRYASPGNGRVEPWEWREEGVLHEQPLRGRVTVNSAEAYIACCIAGMGLIQIPAYDVRRELADGTLVEVMPGHRADPLPMHLLYPHRRHPSQRLQVFVAWLQEVLGEAVR*