ggKbase home page

SCN18_13_7_16_R1_B_scaffold_1273_5

Organism: SCN18_13_7_16_R1_B_SCNpilot_P_inoc_Stenotrophomonas_69_27_68_91

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 2511..3209

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=2 Tax=Stenotrophomonas maltophilia RepID=I0KJW6_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 232.0
  • Bit_score: 426
  • Evalue 1.30e-116
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 232.0
  • Bit_score: 426
  • Evalue 3.60e-117
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 232.0
  • Bit_score: 426
  • Evalue 1.80e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCACAGACCAAGCGTGAGAAGGCCATCAAGGCCGCCGTCGTCCCGGGCAAGACCTATGCCTTCGAGGACGCGATCAACATCCTGAAGACCGTTGCCAAGGCCAAGTTCGTCGAGTCGATCGACGTTGCCGTGCGCCTGGGCGTGGATGCGAAGAAGTCCGACCAGCAGGTGCGCGGTTCGACCGTGCTGCCGGCCGGTACCGGCAAGTCGGTCCGCGTCGCCGTGTTCGCACCGGCCGGTGCCAAGGCTGACGAAGCCCTGGCCGCTGGCGCCGAAGCCGTCGGCATGGACGACCTGGCCGAGAAGATGCAGGCCGGCGATCTGAACTACGACGTCGTCATCGCGACCCCGGACGCCATGCGCGTCGTCGGCAAGCTGGGTACCGTGCTGGGCCCGCGCGGCCTGATGCCGAACCCGAAGGTCGGCACCGTTTCCCCGAACCCGGGCGAAGCTGTGAAGAACGCCAAGTCGGGCCAGGTCCGTTACCGCACCGACAAGGCAGGCATCATCCACTGCACCATCGGCAAGGCCAGCTTCGACAACGCCGCGCTGCAGTCGAACCTGCAGGCGCTGCTGCTGGACCTGATCAAGGCCAAGCCGGCCACCTCGAAGGGCACCTACCTGCAGAAGGTCTCGGTCAGCTCGACGATGGGCCCGGGCGTCACCGTCGACCAGTCGTCGCTGACCCTGAAGTAA
PROTEIN sequence
Length: 233
MAQTKREKAIKAAVVPGKTYAFEDAINILKTVAKAKFVESIDVAVRLGVDAKKSDQQVRGSTVLPAGTGKSVRVAVFAPAGAKADEALAAGAEAVGMDDLAEKMQAGDLNYDVVIATPDAMRVVGKLGTVLGPRGLMPNPKVGTVSPNPGEAVKNAKSGQVRYRTDKAGIIHCTIGKASFDNAALQSNLQALLLDLIKAKPATSKGTYLQKVSVSSTMGPGVTVDQSSLTLK*