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SCN18_13_7_16_R1_B_scaffold_40_24

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 24074..24727

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CH0_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 159.0
  • Bit_score: 107
  • Evalue 1.60e-20
type VI secretion system effector, Hcp1 family similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 211.0
  • Bit_score: 122
  • Evalue 1.40e-25
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:AIF82945.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 211.0
  • Bit_score: 122
  • Evalue 6.70e-25

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGTCGGACAGCACGTCCTACGAAGCCAGCCGCCGCACGGTGATCAAGGGCGGTGCGGTCGGCGCGGGCGCCCTGCTGGGGGCGCTGGGCCTGGGCGCCGGGACGGCGGCTGCCGCCCCGATCGCCGCCCCGGAAGCCACCGTCGCTTTTCCAGCGGCCGCTCCGTCAGGGGACGGCGTCTCGTATTTCCTCAAGCTCGACGGCATCGCCGGGGAGAGCACTCTCAAGGGCCTTGAAGGCTGGATCGAACTGGGCAGCTTCAGTTGGGGCGCGTCGAACTCCGCCGGCTTTGGTAGGCCGGGCTCGGGCGGTGCATCGTCCCGGCCAGCCGAACTCGCCACCACATTCACCGCACCGACCAGCAAGGCGTCGCCGCTGCTGCTCCGCAGCGTCGTGCTGGGCACGCACATCAAGACCGGGCAGGTGGTCGCGGCGAGCCAGAACCAAGCGATCATGGCCCAGTTCCTCAAGTACGAATTCACCGACGTGGCGTTGTCGTTCTACAAAGAGGACATGGCCGACGGATCACGCCCGATGGATTCCTGCGGGTTCCACTTCGCAGCCGGAAAGGTCTCCTACTACCCAACGAACGTGGATGGCATGCTCGGCGAACCCGTCTCCTTCGCCTTCGATTTCCGCACCGGGAAGGTCTAG
PROTEIN sequence
Length: 218
MSDSTSYEASRRTVIKGGAVGAGALLGALGLGAGTAAAAPIAAPEATVAFPAAAPSGDGVSYFLKLDGIAGESTLKGLEGWIELGSFSWGASNSAGFGRPGSGGASSRPAELATTFTAPTSKASPLLLRSVVLGTHIKTGQVVAASQNQAIMAQFLKYEFTDVALSFYKEDMADGSRPMDSCGFHFAAGKVSYYPTNVDGMLGEPVSFAFDFRTGKV*