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SCN18_13_7_16_R1_B_scaffold_307_9

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(12975..14138)

Top 3 Functional Annotations

Value Algorithm Source
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 383.0
  • Bit_score: 417
  • Evalue 1.80e-113
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPL5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 383.0
  • Bit_score: 417
  • Evalue 1.30e-113
NGG1p interacting factor 3 protein, NIF3 similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 383.0
  • Bit_score: 417
  • Evalue 3.60e-114

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGGGCGTGCGGCTGGCCGAGGTCCTCGCGGCGCTGGACGCGGCGTACCCGCCTCGGCTTGCCGAGCCGTGGGACACCGGAATTGGCCTGACCTGCGGCGACCCGGACGACGAGGTCCGGCACGTGCTGCTGGCCGTGGACGTCGACCCGGTGACCGTGCGGCAGGCCCGCGACGTGGGCGCGCAGCTGCTCGTCACCCATCACCCGCTGCTGTTCCGGCCGGTGCAGTCCGTCGCGGCCTCGACGGCGAAGGGCTCGCTGCTGCACACGCTGATCCGTTCCGGCATCGCGCATGTCGCGGCGCACACGAACGCCGACCGCGCCCGCGGTGGGGTGAACGACGCCTTCGCCGAGGCGCTCGGGCTGGTCGATGCGGTGCCGCTGGTGCCCGTGACCCCGCCCGCGCTGGACAAGGTCGTGGTGTTCGTGCCCGTCGACCACGCCGACGCCATGGTGTCTGCGCTGGCCGCCGCGGGGGCCGGGACCATCGGCGACTACGCCGAGGCGGCCTTCGTCTCCGCCGGCGAGGGCCGGTTCACGCCCATGCCGGGGGCGCATCCGGCCATCGGAGCCGTGGGCGTGGCGGAGCGGGTCGCAGAGGCGCGCGTCGAGATGGTGCTGCCGCCCGCGCGCCGCGCCGACGTCGTCGCCGCCCTGCGCGCCGCGCACCCCTACGAGGAGCCCGCGTTCGACCTGTACGAGATGGCGCCGATGGCGCCCGCGGGCGGGGTGCGGGAGGGGCTGGGCCGCCTCGGCCGGTTGCCGGCGCCCATGACGTTGTCCGCGTTCACCGCCCATGTCGCCTCGGCCCTGCCCGCGACCGCCTGGGGCGTGCGCGCGGCCGGCGACCCCGATCGCGTCGTCGAGGCGGTCGCGGTGTGTGGTGGGGCGGGCGGATCCGAACTTCCGTCGGCAACCGCGTCCGGCGCCGATGTCTATGTCACGTCGGATCTGTCGCACCACGTCGTGGCGGAGCATGTGGTGGACCAGGCTCGCCCGGCGGTGGTGGAGGTGGCGCACTGGGCCGGGGAATGGCCGTGGCTGGCGCGGGCCGCGGCGGTGATCGAGGCGGCGTTCGGTGCGGCGGTGACGACGACCGTCTCGACGCTGCGCACCGACGCGTGGACGGTCCACGTCGCGGGGGAGCAGGACGCGCGGCGATGA
PROTEIN sequence
Length: 388
MGVRLAEVLAALDAAYPPRLAEPWDTGIGLTCGDPDDEVRHVLLAVDVDPVTVRQARDVGAQLLVTHHPLLFRPVQSVAASTAKGSLLHTLIRSGIAHVAAHTNADRARGGVNDAFAEALGLVDAVPLVPVTPPALDKVVVFVPVDHADAMVSALAAAGAGTIGDYAEAAFVSAGEGRFTPMPGAHPAIGAVGVAERVAEARVEMVLPPARRADVVAALRAAHPYEEPAFDLYEMAPMAPAGGVREGLGRLGRLPAPMTLSAFTAHVASALPATAWGVRAAGDPDRVVEAVAVCGGAGGSELPSATASGADVYVTSDLSHHVVAEHVVDQARPAVVEVAHWAGEWPWLARAAAVIEAAFGAAVTTTVSTLRTDAWTVHVAGEQDARR*