ggKbase home page

SCN18_13_7_16_R1_B_scaffold_182_28

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 29294..32452

Top 3 Functional Annotations

Value Algorithm Source
Putative type III restriction-modification system restriction subunit (Res) {ECO:0000313|EMBL:CCM64351.1}; EC=3.1.21.5 {ECO:0000313|EMBL:CCM64351.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 1054.0
  • Bit_score: 1183
  • Evalue 0.0
res; type III restriction-modification system restriction subunit (EC:3.1.21.5) similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 1058.0
  • Bit_score: 1112
  • Evalue 0.0
Putative type III restriction-modification system restriction subunit (Res) n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z4Z4_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 1054.0
  • Bit_score: 1183
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3159
ATGAAGCTTCAGTTCAAGGTCCAGGATTACCAAACCGCTGCTGTGGACGCAGTGGTGGACTGCTTCGGCGCGCTGCATCGCCAACCGTTCGCTGACAACGTTACCTACAAGATCGATCCGGGACGCGCGGTGGAGCGACGTGACCAGCCGGAGCTGGATCACGGTCTCAGCGAGGCTACAGCGCGAACCGGATATGGCAACAGCCCGTTGCTTCTCAGCTCTGCCCAGCTTCTCGACAATATTCAGACCGTGCAACGGCGCACTAGCGGGCTTCCGCTGTCATCAGAACTTGTGGCCAGCCCGGCGGCGACGCTGAATCTGGACGTCGAGATGGAGACAGGAACGGGCAAGACCTACGTCTACATCAAGACGATCATGGAGCTTCACCGGCAGTTTGGCTGGTCCAAGTTTGTCGTCGTCGTTCCGAGCATCGCGATCCGCGAGGGTGTGAAGAAGTCTTTCGAGATCACCGCTGACCACTTCCTTGCTGAGTACAAGACTCAGGCCCGAGCGTTCGTCTACGACTCCGATCACCTCGAAGATGTCGAGACCTTCGCATCAGATGCAGGCATCCAAGTCATGATTATCAACGCACAGAACTTCAATCGCGATGCGAAGAGGGCCGACCAGGACCCCAATGAGGCCGGCAAATCGCCGGGGCTCAAGATGTTCAAGACGCTCGATGGGTTCAAGTCTCGGCGTCCCATCGATGTCATAGCGGCGAATCGGCCCATCCTGATCATTGACGAACCGCAACGTCTCGGCAGCAACCCGGCCAAACCTAGCGAGACGTTGAAGGCACTGGGACGCTTTAACGCACTCTTCGCATTGCGCTACTCAGCGACTCACGCTATCGAACACAACCGGGTTCATCGACTGGATGCTCTCGACGCCTACAACAAGAAGTTGGTCAAGAAGATTGCTGCTAGGGGCATCAGCGTGAAGGGTCTCGCCGGGAGTAGCGCATACCTCTATATTGACGGACTTGAGCTTGGCAAGGGTGCTGACTTCCCCAAGGCACGTGTTGAGATTCAACATCAGCCCAAGAGTGGGAACATCACGCTAAAGACGGTGAAGGTCAAGAAGGGTGATCGTCTGCACGACATTTCGGGCGGTATCGAAGCCTACAAGGGTCTCGTCGTCGACGAGATCGATGCCATCGCCAACACTGTCACCCTCTTGGATGGGCAAGTGCTCCAGGGAGGACAGGTTACCAACGATGTGACCGACGAACAGAAGCGCCGACTCCAGATCCGGGAAGTTGTACGCGCGCATCTTGACAAGGAGAGGCAACTCTTCGGTCACGGAATCAAGGCTCTGTCCCTCTTTTTCATCGACGAGGTTCACAAGTACCGTGACTACGACCAACCTGACCGGCAAGGCGAGTACGCCAGAGTTTTTGAAGAGGAATATGAGTCGCTCAGAGCTGAGCGGCTCAGCGAACTCGACCTCGATGAATCGGCCGCGGCGTACCGGGCGTTCCTCGAACGTGACCCGGTACGCGACATCCACAACGGGTACTTCTCGGTGGACAAGAAGACCGGACGGTGGGTGAACAGCGACGCTTCCGATGCTTCAGATGAGAAGGGCAAGGGTCTGTCCAAGGACGCCGAGGCTTACGACGCCATCCTTCGCGACAAGGAGAAGCTTCTCGATCCTGACTTCCCACTCCGTTTCATCTTTAGCCACTCTGCTCTGCGCGAAGGCTGGGATAACCCGAACGTCTTCACTCTTGGATTCCTCAAGAAGGCGACCGCCGGGGACTCTCGACGTCAAGAGGTCGGGCGCGGTCTCCGACTTGCCGTGGATCGGAACGGCGATCGTGCTGACAACCCCGTGACCGTCCACGACATCAACGTTCTGACCGTCGTCACCGAGGAGTCTTACGTCGATTTCGTTGCAGGGTTCCAAAAGGAGACGCTGGGCTTGCTCAGCGCTCGCCCGCGGAAGGCGACACCAGAGTTCTTCGCCGGAGCTGTCCTGCTCGATGTGATCGCAGGTGTTGAACACAAGGTCACGCTGGACGAAGCCAAGCAACTCCAGCACTGGCTCGTCAAGCACGACTTCATCGACTATGACCAGCATCTGACCGACAAGTGGCTAGAACGCGGTAACCTCCCCGAGATTCCCGACATGCCCCCCGCGCTACAGCCGTACTTCTACCAGGTCGCGGAACTGATCGATTCCCTCTACGTTCAGGCGCCGAAGGTCGATGACGGACGCAAGACGAAGGTCGTCCCGATGAACAAGGCAAACTTCGAGAAGAAGGAGTTCCAGGAGCTATGGGCGCGAATCAACCACCGTGTGGTGTACCAGGTCGCGTTCGACTCGAAGGAGCTCATTGCCAACTGCGTTCGAGCGCTCGACACATCCCTGGAAGTGGCGCGGCTCCAGTACGTAGTGACTGAGGGCATCCAGCGGGACATCATCGAGGCAGCTGACCTGGAGTCCGGCGAGAGCTTCAATGTAATCCGAACGAAGTCGTCCGAATCCACCCTGAGCGCGAGCTCCACGGTGCCGTACGACCTGATCGGCGAGATCGCTGAGAAGACGAAGCTCACCCGCCGCACGGTCGCCTCCATACTTCATCAGGTAAGGCCGGGCACGTTCGCGAAGTTCAAGCAGAACCCGGAGCACTTCATCACGGAGGCGGCGCGGCTGATCCGCGAGCAGGCCGCGGCTACGATGGTCGAGCACATTGAGTACGACATCCTCGATGACCGGTACGGCGCCTCGATCTTCACCGAGAATCAAACCGCTCAGGACTTGTCCAAGGCTGTGCACACGCCAAACAAGAGTGTCTATGAGTACGTCCTCGACGACTCACAGGTAGAGCGAGACTTTGGAGCCGCGCTCGACATCAGTGACGAGGTGGCAGTATTCACAAAGCTTCCACGTGGATTCAAGATTCCGACTCCTTTGGACGACTACAACCCTGACTGGGCGATCGCTTTCCAGGACGGTTCCGTGAAGCACGTTTATTTTGTAGCTGAGACCAAGTATTCACTCTCCTCGTTGGAACTTCGTGGTGCAGAGAAAGCGAAGATCGACTGCGCCAACAAGCTCTTCGAGAAGCTCGATGAGGTGGCCGGCACCCCGGGTATTCGGTATCACGGCGTCACGAGCTACGACCACCTCCTACAACTAGTGAGGGCATAG
PROTEIN sequence
Length: 1053
MKLQFKVQDYQTAAVDAVVDCFGALHRQPFADNVTYKIDPGRAVERRDQPELDHGLSEATARTGYGNSPLLLSSAQLLDNIQTVQRRTSGLPLSSELVASPAATLNLDVEMETGTGKTYVYIKTIMELHRQFGWSKFVVVVPSIAIREGVKKSFEITADHFLAEYKTQARAFVYDSDHLEDVETFASDAGIQVMIINAQNFNRDAKRADQDPNEAGKSPGLKMFKTLDGFKSRRPIDVIAANRPILIIDEPQRLGSNPAKPSETLKALGRFNALFALRYSATHAIEHNRVHRLDALDAYNKKLVKKIAARGISVKGLAGSSAYLYIDGLELGKGADFPKARVEIQHQPKSGNITLKTVKVKKGDRLHDISGGIEAYKGLVVDEIDAIANTVTLLDGQVLQGGQVTNDVTDEQKRRLQIREVVRAHLDKERQLFGHGIKALSLFFIDEVHKYRDYDQPDRQGEYARVFEEEYESLRAERLSELDLDESAAAYRAFLERDPVRDIHNGYFSVDKKTGRWVNSDASDASDEKGKGLSKDAEAYDAILRDKEKLLDPDFPLRFIFSHSALREGWDNPNVFTLGFLKKATAGDSRRQEVGRGLRLAVDRNGDRADNPVTVHDINVLTVVTEESYVDFVAGFQKETLGLLSARPRKATPEFFAGAVLLDVIAGVEHKVTLDEAKQLQHWLVKHDFIDYDQHLTDKWLERGNLPEIPDMPPALQPYFYQVAELIDSLYVQAPKVDDGRKTKVVPMNKANFEKKEFQELWARINHRVVYQVAFDSKELIANCVRALDTSLEVARLQYVVTEGIQRDIIEAADLESGESFNVIRTKSSESTLSASSTVPYDLIGEIAEKTKLTRRTVASILHQVRPGTFAKFKQNPEHFITEAARLIREQAAATMVEHIEYDILDDRYGASIFTENQTAQDLSKAVHTPNKSVYEYVLDDSQVERDFGAALDISDEVAVFTKLPRGFKIPTPLDDYNPDWAIAFQDGSVKHVYFVAETKYSLSSLELRGAEKAKIDCANKLFEKLDEVAGTPGIRYHGVTSYDHLLQLVRA*