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SCN18_13_7_16_R1_B_scaffold_204_11

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(6504..8894)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6D490 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 798.0
  • Bit_score: 923
  • Evalue 8.70e-266
tRNA/helicase-type nucleic acid binding protein similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 782.0
  • Bit_score: 845
  • Evalue 1.10e-242
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABK52966.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 782.0
  • Bit_score: 845
  • Evalue 5.50e-242

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2391
ATGACGGAGTCGCAGCGCGGCCGAGCGACCGAAGGCCCGAACGACCCGCGGATGTCCATCGACATCCCCGAGCGTCTCGGCTACCGCATCAAGTGCGCCCTGCTCGGCCGTCCGCTGATCTCGGCCGATCTGCGGCACCAGAAGCTCTCGAAAACGGTGGCGCTGGGCGTGCTCTCGCCCGACTGCATCTCCTCCTCGGCGTACGGCACCGAGGCGATGCTGGTCGAGCTGTTGCCGTGGTTCGGCATGGCCGCGTTCACCATCGTGCTGCCCATCACCGGCGCGATCCTGCTGATCCTCGTGCTGATGACGCTGTCCTATCGGGAGGTCGTCCAGGTCTACACGCGCGCCGGCGGGTCCTATGTCGTCGCCCGGGAGAACTTCGGGCCGCGCGTCGCGCAGGTCGCCGCCGTCGCGCTGCTCATCGACTACGTCGTCACCGTCGCGGTGCAGGCCGCTGCCGGCACCGTCGCCGTGGCGTCCGCCGTCCCGGCACTCGGTCCTTATAGCACCGAGATCACGATCGGCGTCGTCATTCTCATCGCCTACGGGAACCTGCGCGGCATTCGCGAAGCCGGCAAGCTGTTCGCGCTGCCCACCTACGCCTTCACCGCCGCGATGTTCGCCGTCATCGTCGTCGGGATCATCAAGGAGATTTCCGGCACGCTGACGCGATACGACCCGCACGCGCTGGTCGGGACCGTGCCGGTGGACCACAGATCGGGTCTCGTGTTCTTCGTCGTGGTCCTCGTGGTGCTGCGCTCGTTCGCGAACGGCGGGTCGTCGCTCACCGGCCTGGAGGCGATATCGAACGGCGTGAGCGCCTTCCGGGCGCCCCAGGGTCGCAACGCGCGGCGCGTGCTAGTCATCATGGCGAGCATCCTCGGCGTGCTCGTCGCCGGCGTCTCGTGGCTGGCGCATGTCACCCACGCGACGCCGTTTTCGGCCGGCTATCCGTCGGTGATCTCCCAGGAGGCGCGCGCCGTCTTCGGCAACGGCCCGGCCGGCCATGTCTTCTACATCGTCGTTCAGGCGGCCTCCGCGCTCATCCTCTACACGGGCGCGAACACCAGCTTCAACGGCTTCCCGTTCCTGGCCAGCTTCGTCGCCGAGGACTCCTTCCTGCCCCGACAGCTCACCAAACGCGGCCACCGGCTGGTGTTCTCGAACGGGATCATCGTGCTCGCGGGCGTGTCGATCGCGCTGATCGCCGTCGCACACGCCAAGGTCAATACGTTGCTGCCGCTCTACGCCATCGGCGTCTTCACCGGGTTCGCGATGGCCGGCTTCGGCATGGCCCGCTACCACCATGTCCGGCGCGAATCGAGTTGGCGGCGGAGGCTCGTCATCAACGCGTCCGGCGGCGCGCTGTCCGCACTGGTGGTGCTGATCTTCGTCGTGGTCAAGTTCACCGAGGGCGCGTGGCTGGTCGTCCTGCTGTTCCCGATCCTCGTGTTCGTCTTCATCCGCCTCAATCGGCAGTACCGCGCGGAGGCCCGGTCACTGGACCTGGCGACCTGGATCCGCCAGGACCAGGCCGAGGCGCCACGGTATCCGCGGCACGTCGTGCTCGTCATGGTCGACACGCTCGACCTGGCCGCGCTGCGGGCACTGCGCTACGCCGCGAGCCTGCGCCCCACCGAGTTGCGCGCCGTGCATTTCGTCATCGACAACATGGTCGCCGATCGGCTGCAACGCGGATGGGTGGATCGCCGCCTGGGGGATCGGTACCCGCTGGAGATCGTCGAGTGCCCGGACCGGCGCCTGGTGCGTTCGGCCGCCGAATTCGCTCTGTCCACCGTGGTCGGCGAGAGCGCGGAGACCACGGTGCTGCTGCCGCGTCGGACGTATCGGCGCGGATGGGGGCAGTTGCTGCACGATCGCACGGCGGACCGGATCGCCGCCGCCGTCGGGCGGATTCCGCACGTCGCGGCGACCATCGTGCCGTACGACACCACGCTGTCGCATGACGTGGTCGTGCGCCTCGAGGCCGAGGAGCGACGGGCCGCCGCGACCCCGGCCTTGGCACCGGTGGCGAGCGGATCCGGCCGCGTCGGCCATGCCGGTCCGCGCCCGCGGCGAAAGGCCGTGCCGGCGCCGGCGGGCCGGGCGCTCACGCCGATCGCCGATGCGGTGTGGAGGCGGTACGTCACCGTCGAGGGACGCGTCGTCTCGGTGCAAACCAGCTCGATGGCCGGCGTGTCGATGGAGGCCCGGCTGTTCGACGATTCCGGCGGGCTGCGTCTGCTCTTCTTCGGCCGCACCAGCATCCCCGGCATCGCCCCCGGTGCTCGGCTGCGTGCGACCGGCCGCGTCGGCCGATACAAGGATCACCTCGCGATCGCCAACCCGATCTACGAACTGTTGCCGGAGGCGGCGGGCGAGGGGTAG
PROTEIN sequence
Length: 797
MTESQRGRATEGPNDPRMSIDIPERLGYRIKCALLGRPLISADLRHQKLSKTVALGVLSPDCISSSAYGTEAMLVELLPWFGMAAFTIVLPITGAILLILVLMTLSYREVVQVYTRAGGSYVVARENFGPRVAQVAAVALLIDYVVTVAVQAAAGTVAVASAVPALGPYSTEITIGVVILIAYGNLRGIREAGKLFALPTYAFTAAMFAVIVVGIIKEISGTLTRYDPHALVGTVPVDHRSGLVFFVVVLVVLRSFANGGSSLTGLEAISNGVSAFRAPQGRNARRVLVIMASILGVLVAGVSWLAHVTHATPFSAGYPSVISQEARAVFGNGPAGHVFYIVVQAASALILYTGANTSFNGFPFLASFVAEDSFLPRQLTKRGHRLVFSNGIIVLAGVSIALIAVAHAKVNTLLPLYAIGVFTGFAMAGFGMARYHHVRRESSWRRRLVINASGGALSALVVLIFVVVKFTEGAWLVVLLFPILVFVFIRLNRQYRAEARSLDLATWIRQDQAEAPRYPRHVVLVMVDTLDLAALRALRYAASLRPTELRAVHFVIDNMVADRLQRGWVDRRLGDRYPLEIVECPDRRLVRSAAEFALSTVVGESAETTVLLPRRTYRRGWGQLLHDRTADRIAAAVGRIPHVAATIVPYDTTLSHDVVVRLEAEERRAAATPALAPVASGSGRVGHAGPRPRRKAVPAPAGRALTPIADAVWRRYVTVEGRVVSVQTSSMAGVSMEARLFDDSGGLRLLFFGRTSIPGIAPGARLRATGRVGRYKDHLAIANPIYELLPEAAGEG*