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SCN18_13_7_16_R1_B_scaffold_402_17

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 21941..22264

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WKL8_VEREI similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 101.0
  • Bit_score: 78
  • Evalue 3.00e-12
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 101.0
  • Bit_score: 78
  • Evalue 8.50e-13
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABM58175.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 101.0
  • Bit_score: 78
  • Evalue 4.20e-12

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGCACGCACCAACTTTTCGGATCTGCGCCGCGACGTGCGCGCCCGACCCGGCGCGGCCGAACGGCTTGCGGCCAAAAGGGTCGAGACCCTGGAGGAGATCCGCCTGCACGAGCTGCGCCGCTCGAAGGCCGTCAGCCAGGCCGAGCTTGCCGGCCGGTTGGAGATCACCCAAGGGGCGATCTCCAAGCTCGAACACGCCGACGATGTGCGGGTGTCCACGTTGCGCCAGTATCTCGAAGCGCTCGGCGCGGACTTGGAACTCGCCGCCGTCTTCGACGAAGAACACCGCATCCCAATCCATCTGGGTGGCGAACGAAACTGA
PROTEIN sequence
Length: 108
MARTNFSDLRRDVRARPGAAERLAAKRVETLEEIRLHELRRSKAVSQAELAGRLEITQGAISKLEHADDVRVSTLRQYLEALGADLELAAVFDEEHRIPIHLGGERN*