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SCN18_13_7_16_R1_B_scaffold_480_6

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(8086..9012)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 308.0
  • Bit_score: 448
  • Evalue 7.60e-123
Pseudouridine synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCS4_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 308.0
  • Bit_score: 448
  • Evalue 5.40e-123
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 308.0
  • Bit_score: 448
  • Evalue 1.50e-123

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGGTGAGTTCCGGCGTTTCCCGGTGCCCGGGGGCCTCGCGGGCATGCGCGCGGACGCCGGCCTGGCGAAGCTGCTGGGCCTGAGCCGCACCACGGTCGCCACCATGCTCGATGCCGGTGACGCGCTGTGCGACGGCGCGCCGCTGGACCGCTCCGCCCGACTCGTCGCCGGCAGCTGGCTCGACCTCACCCTCCCGGATCCGCCCGCTCCGCTCACCGTCGTCGCGCAGCCCGTCGCCGGGCTCACCGTGATCCACGCCGATGCAGACATCGTGGTCGTCGACAAACCGGTCGGTGTCGCCGCGCACGCATCCGTCGGCTGGACGGGTCCGACGGTCCTCGGCGGGCTCGCCGCGATGGGCATCACGGTCGCCACCTCGGGCGCATCCGAACGTCAGGGCATCGTGCAACGGCTCGACGTCGGCACCACCGGCGTCATGGTCGTGGCGCGCAGCGAACGCGCCTACTCGATCCTCAAGAATGCGTTCCGGCACCGCACCGTGGACAAGGTCTACCACGCCATCGCGCAGGGCCACCCGGACCCCACCGACGGAACGATCGACGCGCCGATCGGTCGACATCCCAAGGCGGACTACAAGTTCGCCGTCATGGCCGGCGGCCGGGAGAGCGTCACGCATTACGAGACGATCGAGGCATTCCCGGCGGCTACCCTCATGCGGGTCCACCTGGAGACCGGGCGCACGCACCAGATCCGGGTGCACTTCTCGGCGCTCCGCCACCCGTTGGTCGGCGACCTGACGTACGGCGCGGACCCGGTGCTCGCCGCCCGGCTCGGGCTCACCCGCCAGTGGCTGCACGCCTATTCGCTGAGCTTCGTGCATCCGGCGGGCGGCAGCGCCGTCACCTACGCGAGCCGCTACCCGGACGACCTCGCGCACGCCCTGGACGTGCTTCGCGGCTCATAG
PROTEIN sequence
Length: 309
MGEFRRFPVPGGLAGMRADAGLAKLLGLSRTTVATMLDAGDALCDGAPLDRSARLVAGSWLDLTLPDPPAPLTVVAQPVAGLTVIHADADIVVVDKPVGVAAHASVGWTGPTVLGGLAAMGITVATSGASERQGIVQRLDVGTTGVMVVARSERAYSILKNAFRHRTVDKVYHAIAQGHPDPTDGTIDAPIGRHPKADYKFAVMAGGRESVTHYETIEAFPAATLMRVHLETGRTHQIRVHFSALRHPLVGDLTYGADPVLAARLGLTRQWLHAYSLSFVHPAGGSAVTYASRYPDDLAHALDVLRGS*