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SCN18_13_7_16_R1_B_scaffold_364_27

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(24417..25271)

Top 3 Functional Annotations

Value Algorithm Source
Lysine decarboxylase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G1J8_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 265.0
  • Bit_score: 363
  • Evalue 1.20e-97
Lysine decarboxylase {ECO:0000313|EMBL:EOD65403.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 265.0
  • Bit_score: 363
  • Evalue 1.70e-97
lysine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 265.0
  • Bit_score: 356
  • Evalue 5.60e-96

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGGCGCGGTGAGCCATAACCACGATGGCGGGAGACCGTCCGGCGACGGGCAGCGGCACCAGTCGCACCGGCGCGATTACGACGACTCGCTGCTGCAGGGGCGCTTCCATCGGCCGGCGACCGACGAGGAGCGGTGGGCGGCCGTTCAGCGCAGCAAGGAGGCCCTGCGGATCACGGCCGACGAGCGGCTGCTCGACTCGCGCGGCCCGCGGGAATGGGTGCATACCGATCCGTGGCGTGTGCAGCGCATCCAGGCGGAGTTCATCGAGGGTTTCCACACCCTCGCGGATCTGCCGCGCGCGGTCACGGTGTGGGGCAGCGCACGCACGCCCCGCGATTCGCAGGCGTACCAGGACGGGCGGCGCATCGGCGAGGCGCTCGCACGAGCGGGCTTCGCCGTGATCACCGGAGGCGGCCCCGGCAGCATGGAGGCGGCGAACCGCGGCGCGCAGGAGGCCGGCGGGCTGTCTGTGGGACTGGGCATCGAGCTGCAGTTCGAGGAGAAGTTGAACGATTACCTCGACGTGGGTATGACGTTCCGGTACTTCTTCGCCCGCAAGATGATGTTCGTCAAGTACTCGCAGGCGCTGATCTGCCTCCCCGGTGGGTTCGGCACGCTGGACGAGCTGACCGAGGCGCTGACGCTGGTGCAGACGAAGAAGGTGACGAAGTTCCCGGTGGTCCTCTACGGGTCGGCGTACTGGGGCGGCCTGGTCGAATGGATCCAGAGCTCGGTCCTCGGCTCCGGCAACATCTCGCCGCAGGACATGAACCTGATCCATGTGACCGACGACGTCGATGACGTGATGCGGGTGGTGCACGAGTCGTACCAGGCCTGGGAGGACGCGCACTGA
PROTEIN sequence
Length: 285
MGAVSHNHDGGRPSGDGQRHQSHRRDYDDSLLQGRFHRPATDEERWAAVQRSKEALRITADERLLDSRGPREWVHTDPWRVQRIQAEFIEGFHTLADLPRAVTVWGSARTPRDSQAYQDGRRIGEALARAGFAVITGGGPGSMEAANRGAQEAGGLSVGLGIELQFEEKLNDYLDVGMTFRYFFARKMMFVKYSQALICLPGGFGTLDELTEALTLVQTKKVTKFPVVLYGSAYWGGLVEWIQSSVLGSGNISPQDMNLIHVTDDVDDVMRVVHESYQAWEDAH*