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SCN18_13_7_16_R1_B_scaffold_55_9

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 10823..13453

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulatory protein degU n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SAB1_ACTS5 similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 881.0
  • Bit_score: 241
  • Evalue 2.20e-60
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHD73548.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.4
  • Coverage: 879.0
  • Bit_score: 269
  • Evalue 1.40e-68
transcriptional regulatory protein degU similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 882.0
  • Bit_score: 241
  • Evalue 6.20e-61

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2631
ATGACGCTGTTCGTCGGCCGGCAGGCCGAACTGGCCGCACTCACCGAAGCCGTGCGCGAGGGACGATGCCGGATCGCCGTCGTCGGTGAGGCAGGTGTCGGCAAGACGACGCTCATTCGACACGCGGTGCGCGACAGCGAGTCTCGCCCCACCGTGCTCGAAGGCGGCGCGCTGCGGACCCTGGCATGGTCCCCGTTCCTGCCGCTCAAGCGTGCGCTGGGTGATCGCACCGACGCATCGGTGTGGAGCGGCGATGCCGAGTTCGTGGCGGCCGCGGTCGAAGCCGCCGTCGGCTCCGGGCTGCTGGTGATCGACGATGTGCAATGGGCCGACGGCGCCACGCGGGCCGTGCTCGACCTGCTGGCCGGGCGGATCCGACTGGTGGTGGCGGTCCGCAGCGGCGAACCGTCCGCGGCAGCGACACTGGATCGGCTCCGCGGGCACGAATTCCGCCGCATCGACGTCGCGCCGCTGGGCCGAGCCGACGCGCTGACCGTCGCGCGTCATGCCCGACCCGGTATCGCGGAGCACGAGGCCGAGACGATCGTCGCCCGCTCCGGGGGCAACCCGTTGCTCGTCGAGGAGCTGGCCGCCGGCAACGTGGACAGCCTCAAACTCGCGATGGCGGCGCGGCTCGATGCCTTGCCGCCGTCCGTCACGGCGGATGTCGAACTCCTGGCGCTCGCCGGTGACGCGGTGCCGATCCCGTTCGTGGATGACCCAGCTCCGCTGACGGCATCGGGCCTCGCGCACGTCGACGCAGGCCGGATCGGTATTCGCCACGCGCTGCTCGCGGAGGTGATCGTCGACGCCATGCCGGATGAGCGCCGACGCGAGGTTCATCGACGTCTCGCCCAGGGATCGGCACTGGCCGGTGTCGCGGCTCGGCACTATCAGCTCGCCGGCGATGGCGCGCGTGCTTACGCCTCGGCCATGGTCGCCGTCGAAGAGGCGACCACGCCGGGTGAGCGATCCGAACACCTCATGACGGCGGCGGCCTGCGCGTCACCGACCGTGGGGCCGGATCTGATGATCCGCGCCGCCGCGGACGCCGTGCAGGCGGGGGACTTCGCCGGGGCCGGAGACCTCTTGCAGCGCGCGGGATCCGCCGCCGGTTCGGCGACCGCGACGCTGCTGCGCGCCCGCGTCTTCAGTGAGACCGGTGACGGCGAGAATTGGCTCCGGGTGGTCGATGAGGCGCTGGCGTCCGATGCCCGGCCCGAGGGTCGGGGCCCTGACGGACGGAGCCCTGACGGACGGAGCGGTGCGAGCGACGGCGGCCGGGCGATGCTGCTGGCCGAGGGAGCGCGGGCGCTGCTGATGGCGGCCGGCGACGTCCAGGGAGCGGTCCGCCAGGCCGAGGCGGCCGTTGCCGAGGCCGACCGGTCCGGCAGCCTCGACGGTTATCCGCACTACGTTCTAGGCACCGCGCTCTACTACGCGGGTGACCCGGGCTGGGAGCGCCACCTCGGCCGGGGGCGCGAACTGTCCCGCGGTCAGGGGGACGTCGTCAACGAGATGCGCTCGGCCAACAACCTTGTCGTCGGTCACGAGGGTGCGGGTGACCCGGCCGCCGGACGGGCCATCGCCGAGGAGATGATCGGGCGTGCCGAGGAACTCCGGCTACTGCGCTGGCAGCGCCATTTCTCCGCCGCCGCCTTGAATCTCGCGATGCACGCCGGCGACTACCGCGCAGTAGTCGAGGGTGCGCCTGCGCTGCTGGCCGGCCAACTGATGGGGCGGACACGGGACGAGGTCACCTCTGCCTACGCGCTGGCCCTGGTCAACCTCGGGCAGATCGACGAAGGCCTGCGGGTGGCCGAACGTTACCTTGTCGGTTCGGGTCTGTGCGCCTCGAACCTGATCCACCTCCGCGGGTTGGTCGCCTGGTACGCGGGGGACGATGCCGCTGCGCTGGCCGAGTGGCCAGCGTTCCGTGACGCCGCGGAAAGCGCCCATCGGCTGGCGCTGGCGGCGCCGCTGTTCGTTCACGCAGCGCACGCCTGCGGTGTTGCCGACCTCGACCTGCCCGACCTCGACGAGGCATGCGCGTTGCCGCTACTGCGCGCGGTTCCGCGCGAGTTGGCCGCCATCCGGGCGGAAGACAGCGATCCCGGCCGGGCGGCCGCCGACTACGCCGCGGCCGCGGAACTGTGGGCTCCGTACCATCGGCAGGGCGAAGTTCGCTGCCGGTGGCTGTCGGGCGTGTGTCTGCTGCGAGCCGGTGAACGCGAACGCGCCGTCGAGACACTGCGCGCGGCAGGGGATCTCGCGCAGCGGCACGGCATGGTGCCGATGTCGGCGATGATCGAGCGTTCGCTCCGCGAGGCAGGTGTCCGGCGGGCGGTGCGTCGCACGCCCGGGGTACTCAGCGCGCGCGAGTCGGAGATCCTCGAACTCGTCGGCCGCGGTCTGGCCGACGCGGCCATCGCCGCGCGGCTCGGCATCTCCGTGCGCACGGTGCAGACCCATGTCGCGGCGGCCAGGAGCAAACTCGGCGCCGGGAACCGACGGCAGGCCGCCGTGCTGGCTGCTGCGGGGAACTCCGTGGGCGAAGAGGATTCGGTGCTTCCCGCCGACCCGACCGGATCGGCGGTCGCCGCTGATTCGGTGGGATCGGCGCGGCGATGA
PROTEIN sequence
Length: 877
MTLFVGRQAELAALTEAVREGRCRIAVVGEAGVGKTTLIRHAVRDSESRPTVLEGGALRTLAWSPFLPLKRALGDRTDASVWSGDAEFVAAAVEAAVGSGLLVIDDVQWADGATRAVLDLLAGRIRLVVAVRSGEPSAAATLDRLRGHEFRRIDVAPLGRADALTVARHARPGIAEHEAETIVARSGGNPLLVEELAAGNVDSLKLAMAARLDALPPSVTADVELLALAGDAVPIPFVDDPAPLTASGLAHVDAGRIGIRHALLAEVIVDAMPDERRREVHRRLAQGSALAGVAARHYQLAGDGARAYASAMVAVEEATTPGERSEHLMTAAACASPTVGPDLMIRAAADAVQAGDFAGAGDLLQRAGSAAGSATATLLRARVFSETGDGENWLRVVDEALASDARPEGRGPDGRSPDGRSGASDGGRAMLLAEGARALLMAAGDVQGAVRQAEAAVAEADRSGSLDGYPHYVLGTALYYAGDPGWERHLGRGRELSRGQGDVVNEMRSANNLVVGHEGAGDPAAGRAIAEEMIGRAEELRLLRWQRHFSAAALNLAMHAGDYRAVVEGAPALLAGQLMGRTRDEVTSAYALALVNLGQIDEGLRVAERYLVGSGLCASNLIHLRGLVAWYAGDDAAALAEWPAFRDAAESAHRLALAAPLFVHAAHACGVADLDLPDLDEACALPLLRAVPRELAAIRAEDSDPGRAAADYAAAAELWAPYHRQGEVRCRWLSGVCLLRAGERERAVETLRAAGDLAQRHGMVPMSAMIERSLREAGVRRAVRRTPGVLSARESEILELVGRGLADAAIAARLGISVRTVQTHVAAARSKLGAGNRRQAAVLAAAGNSVGEEDSVLPADPTGSAVAADSVGSARR*