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SCN18_13_7_16_R1_B_scaffold_431_6

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(10263..11240)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0K984_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 319.0
  • Bit_score: 273
  • Evalue 2.50e-70
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EHK83969.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 319.0
  • Bit_score: 273
  • Evalue 3.50e-70
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 324.0
  • Bit_score: 243
  • Evalue 7.90e-62

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGCTGAAGCGACCCACCCTGGACACGGTGGCGCAACAGTGCGGCGTGTCGACTTCGACTGTGTCTCGCGCACTTTCGCGTCCTGAGTTCGTGAAACCAGCTGTGCGAGAACGGATCCTCGCCGCAGCGACGCAGATCGGTTACCGGCCCAACAAGATGGCACGCGGCCTCGCGACGGGCCGGCTGGGCCGGTTGGGCCTGCTCGTGCCGGACGTGGCGAACCCGTTCTTCACCGAGTTGCTTCGGGTGGTGCACCACGTCGCATCCACAACGGCACGGTGTTCGCTGCTGATCGTCAACAGCGACGAACGACCCGGCGAAGAGGCCGATCTCATTGCCGGCCTGTCGGAGGAAGTGGACGGCGTGATCGTCGCATCGCCACGTGCGCCCACGAGTGCGCTGACGCAGGCGGTCGACGGGACGCCGGTGGTGTTCATCAATCGGCCCATCACGGGGTACGACGCAGTGCTCATCGAATACGAGGACGCGATTGTGCAGGCCGGCGAGCACCTCATCGCGGAGGGGCACGAGACTATCGCGCTGGTACGCGGCCCATCAGCATCGTGGGCCGCCGCCCAACGAGCCAATGCGTTGACTCGATGGGCCAAGGGGCGACGGGTGCGGTTGATCGATCTGGGAGCGGGAGCGCCGACCTTCGAGGCCGGCCTCGATTCCGTGCGCCGCATCATCGACGGCGATGCCACCGCGGTGGTCGCTTACGACGACATGGTTGCCAGCGGCGTCATTGCAGGCCTGCACGCGGCGGGCCGCAGTGTGCCGGGTGATATTGCCGTGGTCGGATGCGACGACACCCTGCTCGCGAGGCTGCTGACCCCGGCGATGACAACCGTGAGTCCGCCGTACGCGCAGATCGGCGTGGCGGCGATGAATCTGCTCAACGCCCGGATCGACGATCCGACCGCGCCGGCACGGCGAATCAAACTCCCGTGCACTCTGGTGATCCGAGAATCTTCCTAG
PROTEIN sequence
Length: 326
VLKRPTLDTVAQQCGVSTSTVSRALSRPEFVKPAVRERILAAATQIGYRPNKMARGLATGRLGRLGLLVPDVANPFFTELLRVVHHVASTTARCSLLIVNSDERPGEEADLIAGLSEEVDGVIVASPRAPTSALTQAVDGTPVVFINRPITGYDAVLIEYEDAIVQAGEHLIAEGHETIALVRGPSASWAAAQRANALTRWAKGRRVRLIDLGAGAPTFEAGLDSVRRIIDGDATAVVAYDDMVASGVIAGLHAAGRSVPGDIAVVGCDDTLLARLLTPAMTTVSPPYAQIGVAAMNLLNARIDDPTAPARRIKLPCTLVIRESS*