ggKbase home page

SCN18_13_7_16_R1_B_scaffold_4600_1

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 485..1156

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003751E4F similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 193.0
  • Bit_score: 152
  • Evalue 2.60e-34
TetR family transcriptional regulator {ECO:0000313|EMBL:GAM49351.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 200.0
  • Bit_score: 158
  • Evalue 8.70e-36
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 198.0
  • Bit_score: 139
  • Evalue 8.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGACACGTCATGAAAATCCGGCCGAGCGCGGATCGGTGGCGGCCGAGTGGGGTTCGGTCGCCGAGTCGATGCTCTCGGAGCGTCAGGCCGCGCACCATGGCGACGAGCGAAAAGAGCAGATCCTGGAGGCGGCAGAGACCGTCTTCGCCGAGAACGGGTACGACGCTGCGTCCATCGCCGAGATCGCGACGCGAGCTGGGATGTCGCAGGCGGGCATGCTGCACCACTTTCCCAGCAAGGCGGCCCTGTTGATCGCGGTGCTGGACCGGCGGGACGACCTCGACGCCGCGCAGATCCAGGTTCTGGACAACCCGGGCGGCATCGCGATCCTGCGTGGCATGGCGATGTTGATCCAGGCGAATGTGCCGCACCGCAACGAGACTCGGCTGAAACTCGTGATGGCAGTGGACGCGAGCAATCCCGCGCATCCCGCGCATCAGTGGGCGCAGCAGCGGTACCTGTGGGGGTGCCGGATGCTGGCTGCGGGATTCCAGCGGGACATCGAGGCGGGCCGCGTCCGGTCCGATTTGGATGTCGACTCGACCGCCAGCGCGATCTTCGCGGTGATGGACGGCCTGAAGCTGCAGTGGCTGCTCGACCCGGAGCGGGTCGACATGGGCGCGACGTTCGGGAACGTCGTCGAGGAGATGATCGCCGCCATCGTCATCTGA
PROTEIN sequence
Length: 224
MTRHENPAERGSVAAEWGSVAESMLSERQAAHHGDERKEQILEAAETVFAENGYDAASIAEIATRAGMSQAGMLHHFPSKAALLIAVLDRRDDLDAAQIQVLDNPGGIAILRGMAMLIQANVPHRNETRLKLVMAVDASNPAHPAHQWAQQRYLWGCRMLAAGFQRDIEAGRVRSDLDVDSTASAIFAVMDGLKLQWLLDPERVDMGATFGNVVEEMIAAIVI*