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SCN18_13_7_16_R1_B_scaffold_10408_1

Organism: SCN18_13_7_16_R1_B_Nakamurella_69_21

near complete RP 44 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 679..1401

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Frankia sp. CN3 RepID=G6HEG2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 240.0
  • Bit_score: 293
  • Evalue 1.30e-76
Polysaccharide deacetylase {ECO:0000313|EMBL:EFC83370.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 248.0
  • Bit_score: 285
  • Evalue 5.10e-74
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 240.0
  • Bit_score: 279
  • Evalue 7.40e-73

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Taxonomy

SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGTCGTCGCCGTCGACGTCCAGCAAGCCTCCCACTTCCAACACGCCGCCCGCGTCGACACCGCCTCCGTCGGGCATCCCGGCCGCGCTGCGCGGGCAGGACATCGAGCGGATTCCCACCGACAAACAGGTTGTCGCGCTGACCTTTGACGCTGGCGCCAATGCCGCCGGGGTCGCCTCGATACTCGCCACGCTGGCCCGTGAGAAGGTCCCCGGAACGTTCTTCCTGACCGGCCGGTTCGCCGAGCAGTTCACCGGCGAGGCCCGCCAGGTCGCGGCCGCACAACGTGTGGGGAACCACTCGGTCACCCATCCGCAGTTCAGCACACTCAGCGCGGAGCAGGTCCGCGAACAGGTGCTCGGCGCCGCCGCGACGATCAAGCGCATCACGGGAGCGGACCCTGCGCCCCTGTTCCGCTTCCCGTTCGGTGACCGCACCGCGAGCAACATCGCCGCGCTCAACGCGCTCGGTTACGTCCCGGTGGGCTGGACCGTCGACTCCCTCGGCTGGAAGGGCACGTCGGGCGGCATCACCGCAGATGTCGTGGTGCAGCGGGTGCTGTCCGCACTGCAACCGGGCGAGATCGTGCTGATGCACGTGGGATCGAACCCCGACGACGGCTCCACCCTGGACGCCGCCGCCTTGCCGCGGGTGATCTCCGCGCTCCGAGACCGCGGTTACGGCTTCGTCTCGCTGGACGCGCTGTTCACCGGTGTGCCGTGA
PROTEIN sequence
Length: 241
MSSPSTSSKPPTSNTPPASTPPPSGIPAALRGQDIERIPTDKQVVALTFDAGANAAGVASILATLAREKVPGTFFLTGRFAEQFTGEARQVAAAQRVGNHSVTHPQFSTLSAEQVREQVLGAAATIKRITGADPAPLFRFPFGDRTASNIAALNALGYVPVGWTVDSLGWKGTSGGITADVVVQRVLSALQPGEIVLMHVGSNPDDGSTLDAAALPRVISALRDRGYGFVSLDALFTGVP*