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SCN18_10_11_15_R5_P_scaffold_3_64

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(67146..68039)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 310.0
  • Bit_score: 349
  • Evalue 2.70e-93
tRNA pseudouridine synthase B n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4A9_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 310.0
  • Bit_score: 349
  • Evalue 1.90e-93
truB; tRNA pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 310.0
  • Bit_score: 349
  • Evalue 5.50e-94

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Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCGCAAGAAAAAGGGCCTCAAGCTCGACGGCTGGTTGATCATCGACAAGCCGCCGGGCCTCACCTCCGCGCATGTCGTGGCCAAGGTCAAGCGGATGACCCAGGCTGCCAAGATCGGCCATGCCGGCACGCTCGATCCGCTGGCCACCGGCATCCTGCCGCTGGCGCTGGGCGAGGCGACCAAGACTGTTTCCTATGCCATGGACGGCGCCAAGACCTACCGATTTACCGTCCGTTGGGGCGAGGGGCGCGATTCCGACGATTCCGAGGGCGCGGTGACGCAAACCTCGGATGCCAGGCCGGACCGGGCGGCGATCGAAGCGGCCCTGCCAGGTTTCCGCGGCGACATCATGCAGGTGCCGCCGGTCTATTCGGCGCTGAAGGTCGATGGCGAACGCGCCTATGACCTGGCCCGCCGCGGCGAAGCCCCCGTCCTCGAGGCACGCCCGATCCGCATCGACCGCTTCGACCTGATCGACATGCCCGACGCCGATCACGCCGTGTTCGAGGTCGATTGCGGCAAGGGATCCTATATCCGCGCCCTGGCCCGCGATCTCGGCGCCGTGCTCGGCTGCTATGGCCACATCGTGGCCCTGCGCCGCACCCGGGTCGGGCCCTTCCGCGAGGAACAGGCGTTTTCGCTGGAAAAACTCGGGGAATTGTGGGAGAACCCGCCGTCTTCGGACACCCTGTTGCCGGTCGAGACCGCGCTGGACGACATCCCGGCGCTGGCCGTGACCGGCCCTCAGGCGGACCGCCTGCGTTCCGGGCAGGAGATCAGGGTCATCCATCGTGATGACGGCATCTCCCGCGTGATGAATGCAGGCACCCTCGTCGCCCTCGCCGAAATCGAGGACGGCTGCGTCCGCCCGGTCAGGGTCTTCAACCTCTGA
PROTEIN sequence
Length: 298
MRKKKGLKLDGWLIIDKPPGLTSAHVVAKVKRMTQAAKIGHAGTLDPLATGILPLALGEATKTVSYAMDGAKTYRFTVRWGEGRDSDDSEGAVTQTSDARPDRAAIEAALPGFRGDIMQVPPVYSALKVDGERAYDLARRGEAPVLEARPIRIDRFDLIDMPDADHAVFEVDCGKGSYIRALARDLGAVLGCYGHIVALRRTRVGPFREEQAFSLEKLGELWENPPSSDTLLPVETALDDIPALAVTGPQADRLRSGQEIRVIHRDDGISRVMNAGTLVALAEIEDGCVRPVRVFNL*