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SCN18_10_11_15_R5_P_scaffold_67_19

Organism: SCN18_10_11_15_R5_P_Alphaproteobacteria_68_131

near complete RP 47 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(21343..21990)

Top 3 Functional Annotations

Value Algorithm Source
choline ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B322A2 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 215.0
  • Bit_score: 305
  • Evalue 2.30e-80
Substrate-binding region and inner membrane component of ABC-type glycine betaine transport system {ECO:0000313|EMBL:KFC74814.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 215.0
  • Bit_score: 323
  • Evalue 1.20e-85
ABC-type proline/glycine betaine transport systems, permease component similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 215.0
  • Bit_score: 292
  • Evalue 5.80e-77

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
TTGGACACGCTGCGCTTTGCCATCGACAACTGGCCGATCATCGCCGTCAGGGCGGGCGAGCATCTGTCGCTCGTCTCGGTCGCGGTCGCCCTGGCGATCGTCACCGGGGTGCCGATCGGCATCCTGATCACCCAGCACCGCGGCTGGGCCGATCGCGTGCTCTACGTCGCCGCGATCGTCATGACCATTCCCTCGGTCGCGCTGTTCGGCGTGCTGATCCCGCTGCTGTCGCCGATCGGTCATGGCATCGGCTATCTGCCGGCGGTGATCGCCCTGATCCTCTATTCGCAGCTGCCGATCATCCGCAACACCTACACGGCGATCATGAACATCGATCCGGCCCTGCGTGAGGCTGCGCGGGGCATGGGCATGACGTCGCTGCAGCGGCTGCGCGAGGTCGAACTGCCGATCGCGCTGCCGGTGATCGTCAACGGGGTGCGCAACGCGGTCGTTCTTAACATCGCGATCGCCACCATCGCGACCTACATCGGCGCCGGCGGTCTCGGCACCTTCATTTCGCGCGGCATCTCCCAGACCGACTTCCGGCAGCTGGTGACGGGGGCCGTCGCCGTCTCGGTGCTGGCGATCACGGCCGATCTCGCCCTGGTCTATCTGCAGCGACGGCTGACGTCGCCCGGCCTGCGCTGA
PROTEIN sequence
Length: 216
LDTLRFAIDNWPIIAVRAGEHLSLVSVAVALAIVTGVPIGILITQHRGWADRVLYVAAIVMTIPSVALFGVLIPLLSPIGHGIGYLPAVIALILYSQLPIIRNTYTAIMNIDPALREAARGMGMTSLQRLREVELPIALPVIVNGVRNAVVLNIAIATIATYIGAGGLGTFISRGISQTDFRQLVTGAVAVSVLAITADLALVYLQRRLTSPGLR*