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SCN18_10_11_15_R4_P_scaffold_164_19

Organism: SCN18_10_11_15_R4_P_Rhizobiales_68_13

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 18858..19682

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V411_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 254.0
  • Bit_score: 362
  • Evalue 3.50e-97
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 254.0
  • Bit_score: 362
  • Evalue 9.90e-98
Variovorax paradoxus strain MEDvA23 contig_89, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21246.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 254.0
  • Bit_score: 362
  • Evalue 3.70e-97

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGACCGACACCCTTCTCGTCCAGTCCACGCGCGCCAACGTGCTCTCCAAGCTCATGAGCATGGATGCCATCCGCCCGCTCATCCTGGTTGCGGTGATCCTGGTGGGGTGGGATCTGGCGGTGCGCCTGCTGCGCATCCCGCCCTATCTCATCCCCGCGCCGACCCTGGTGATCGAGCAGGTCATCGCCCAGTGGCCCATGCTGCTGCGCGAGACGATGCCCACCCTCTACGCCACGCTGGGCGGCTTCGCCCTGAGCGCGCTGGTGGGCATTCCGCTGGCCATGCTCATCGCCTCCTCGAAGACGGTGGAGAGCTATCTCTATCCCCTCCTCGTCTTCTCCCAGTCGGTGCCGAAGATCGCGGTGGCGCCGCTGTTCGTGGTGTGGTTCGGCTTCGGCGTGCTGCCGAAGATCATCTCCGCCTTCCTGCTCGGGGTGTTCCCGGTGGTGGTCTCCACCGTGCTCGCGTTCAAGAGCGTGGACAAGGAGATGATCGACCTCGCCCGTTCCATGCGCGCCGGGGGCCTGCGTACCTTCATCCGCATCCGCCTGCCCCATGCCTTGCCTGGCATCTTCTCGGGGCTGAAGGTGGCCATCACGCTTGCCGTGGTGGGCGCGGTGGTGGGCGAGTTCGTCGGCTCCAACTCGGGCATCGGCTACGTGCTGCAGGTGGCCAACGGCAATTTCGACCTTCCGCTCATGTTCGCCGCCTTGTTCGTGCTGTCCATGATGGGGGTGATCCTCTTCATGGCGCTCGATGCCATCGAGCACTTCCTCATCCCCTGGCACGCCTCGCGCCGGCCGGACATCAACGGCGGGGCGTAA
PROTEIN sequence
Length: 275
MTDTLLVQSTRANVLSKLMSMDAIRPLILVAVILVGWDLAVRLLRIPPYLIPAPTLVIEQVIAQWPMLLRETMPTLYATLGGFALSALVGIPLAMLIASSKTVESYLYPLLVFSQSVPKIAVAPLFVVWFGFGVLPKIISAFLLGVFPVVVSTVLAFKSVDKEMIDLARSMRAGGLRTFIRIRLPHALPGIFSGLKVAITLAVVGAVVGEFVGSNSGIGYVLQVANGNFDLPLMFAALFVLSMMGVILFMALDAIEHFLIPWHASRRPDINGGA*