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SCN18_10_11_15_R4_P_scaffold_164_20

Organism: SCN18_10_11_15_R4_P_Rhizobiales_68_13

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 19906..20934

Top 3 Functional Annotations

Value Algorithm Source
nitrate ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000368FA39 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 323.0
  • Bit_score: 348
  • Evalue 6.50e-93
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EJL76229.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 323.0
  • Bit_score: 347
  • Evalue 2.00e-92
putative ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 333.0
  • Bit_score: 346
  • Evalue 5.30e-93

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGATCTCGCGCAAGATCTCTCGAAGGACATTCGCCACGCGCCTGTTATCCGGCGCATTCGCCCTCGGCCTTGCCACGGCATCGACGCTGCCGGCGGCCGCGCAGGCTGGCAAGACGCCGGACAAGGCGGTGCTGATGCTCAACTGGTACGTCTATGGCGAGCACGCGCCCTTCATCCTCGGCCTCAAGAAGGGCTATTACGCGGAAGAAGGCATCGACCTCGACATCCAGGAGGGGCGCGGCTCGGCGGTGACCATCCAGGCGGTGGGCGCCGGCACGGCGACCTTCGGCCTCGCGGACATCGGCGTGATGATCAAGGCGGTGGCCAAGGGCGCGCCGGTGAAGACCATCGGCGTGCTGCTCCAGCGCACCCCCGGCGCGGTGGTCGCCCCCGAGGGCAAGATCAACGGCCCCAAGGACCTGCCCGGCAAGACCATCATGTTCACGCCCGGCGACGCCGTGACGCCCATCTGGCCGCTGTACCTGAAGAAGCTCGGCATCCCCGAGGGCGCGGTGAAGATGGTGGCGGCGGACGCGCAGGCCAAACTCAACGCCGTGGTGAACAACCAGGCCGACGGCCTCATCGGCTTCACCACCGAGCAGGGCGCGCGCCTGCCGGACATCATGAACAAGCCGGTGACCATGCTGCGCTACACCGATGCGGGGGTGAACCTCGTGTCCCTCGGCATCGTCGCCAACACCGACACGCTCACCAAGCGCGCCGACATGGTGAAGCGCTTCATGCGCGCCACCACCCGCGCGGTGGAAGAGGCGGAGAAGAACCCCAAGGCCGCCATCGACATCCTCATGGAGGCCTATCCCAAGATCGGCTTGCCGGACGCGCAGCTGCGCAGCCTGCAATATTCGCAGGCGCTCTACCGCGCCTCCGACGACAAGAGCACCCGCCCCTTCCGCATGAACCCGGCGCTGATGGACGAGAGCCTCGAGATCCTCACCCAGTATGGCGGCCTCGACCCCTCCGCGCGCAGCAAGGCGCAGGATTACTTCACGCTGGAGTTCCTTCCGTGA
PROTEIN sequence
Length: 343
MISRKISRRTFATRLLSGAFALGLATASTLPAAAQAGKTPDKAVLMLNWYVYGEHAPFILGLKKGYYAEEGIDLDIQEGRGSAVTIQAVGAGTATFGLADIGVMIKAVAKGAPVKTIGVLLQRTPGAVVAPEGKINGPKDLPGKTIMFTPGDAVTPIWPLYLKKLGIPEGAVKMVAADAQAKLNAVVNNQADGLIGFTTEQGARLPDIMNKPVTMLRYTDAGVNLVSLGIVANTDTLTKRADMVKRFMRATTRAVEEAEKNPKAAIDILMEAYPKIGLPDAQLRSLQYSQALYRASDDKSTRPFRMNPALMDESLEILTQYGGLDPSARSKAQDYFTLEFLP*