ggKbase home page

SCN18_10_11_15_R4_P_scaffold_298_11

Organism: SCN18_10_11_15_R4_P_Rhizobiales_68_13

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(9363..9752)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 244
  • Evalue 5.40e-62
DNA-directed RNA polymerase subunit omega n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=RPOZ_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 244
  • Evalue 3.80e-62
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 244
  • Evalue 1.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCCGTGTCACCGTAGAAGACTGCATCGACAAGGTGGACAACCGGTTCGAGCTGGTTCTGCTCGCCGCCCACCGCGCGCGCATGATCTCGTCCGGCCAGCAGATCACCATCGACCGGGACAACGACAAGAACCCTGTCGTCGCCCTGCGCGAGATCGCCGACGAGACCGTGAGCCCCGAGGATCTCAAGGAAGACCTCATCCACTCGCTGCAGAAGTACACCGAGGTGGATGAGCCCGAACCCGAGGCCGTGCCGCTCATCGCGTCCAGCGACAGCTCCGGCGGCGAGGACAGCGACGTCATGCTCGACCGCATGACCGAGGAAGAGCTGCTCGCCGGCCTTCAGGGCCTCGTGCCCCCCGAGCACAACGACGACGACGAGGGCTGA
PROTEIN sequence
Length: 130
MARVTVEDCIDKVDNRFELVLLAAHRARMISSGQQITIDRDNDKNPVVALREIADETVSPEDLKEDLIHSLQKYTEVDEPEPEAVPLIASSDSSGGEDSDVMLDRMTEEELLAGLQGLVPPEHNDDDEG*