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SCN18_10_11_15_R4_P_scaffold_318_41

Organism: SCN18_10_11_15_R4_P_Rhizobiales_68_13

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(36150..38123)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QDB7_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 686.0
  • Bit_score: 581
  • Evalue 6.70e-163
Ligand-gated channel protein {ECO:0000313|EMBL:ETR76269.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 673.0
  • Bit_score: 615
  • Evalue 5.90e-173
ligand-gated channel protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 671.0
  • Bit_score: 585
  • Evalue 1.00e-164

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Taxonomy

CN-SCN_Mesorhizobium_20x → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1974
ATGCCGTCCCTTGCCCCGTCCCGATCCCGCCGCGCGCTGCCGGCCGCGACTTTGCTCGCCTTCGCCTGCGTGCCGCCCGCGCTCGCCCAGACCGCAGACGATCAGAATGCCGGCGACCTTCCCACCATCGTCGTCAGCGCCACCGGCATTCCCACGCCCGAGGACGAGGTGGCGAGCTCCGTCAGCATCGTCACGGAGCAGGACATCGCCCGCAACCAGCAGCGCACCCTGCCGGACGTGCTGCAATCGCTGCCCGGCCTCAACGTGGTGCAGACCGGCGGACCGGGCGGGACCACCTCGGTGTTCATCCGCGGCACCAATTCCAATCATGTGAAGGTGCTGATCGACGGCATCGACGCCGGCAATCCGGCCGCCACCAACGGCGCCTTCGATTTCGGCAAGCTGCTCGCCTCGGACCTCGATCGGGTGGAGGTGCTGCGCGGTCCGCAGTCCGGCCTCTACGGCTCGGACGCAATCGGCGGCGTCATCTCCGTCACCACCAAGAAGGGCGAGGGGCCGCCCAAGGTCACCGCCTATGCGGAGGGCGGCGCGCTCGGCACCTTCAACCAGTATGCGAGCCTGACCGGCGCCACCGAGAAGCTGGCCTATTCGTTCAACGTCACCCACTTCTCGTCCACCGATACTCCGGTGACACCGCAGAACATCGTGCCCCCCGGCTGGCCCATCAATCCCAACGCCTACGACAACTGGACCTACTCCACCCGGCTCGACTGGCAGGCCACGGAGACCTTCGCGGTGAATTTCGTCGCGCGTTACATCGACACCAGCCTCGCCTTCACGCCGGACACCTATCCCCCGCCCACCTATGCCGGCATCCCGGCGGCGCTGCGCTCCACCGCCTATGCCAGCATGTTCTTCACCAAGGGGGAGGGCGTGTGGACGGCGCTGGACGGAAGCCTCGTCACCACCTTCGGCGTGAGCGATATGTCCAGCTCCAACCCGACGGTCGGGCCGAACCCGGATGTGAACGGCACCTATGACGGCGACCGGCAGGTCTATTACGTCCGCTCCAACTATCTGGTGGCGCCGGGCCAGAACCTGCTGGTGGGCGCCGAGCGGCGGAACGAGTCCATGACCTCCTCCACCGCCTATGCCAGCGTGGATGCCTCCACCGGCGACACGGGCGTCTATGCCGAGTATCAGGGCAACCTCTGGAACCGGCTCTTCTTCGCCGCCAATGTGCGCTACGACGCCGACGACAGTTTCGGCGACCACACCACGTTCCGCCTCGCCCCGGCGCTGCTCTTCGACGAGACGGGCACCAAGCTGAAGGCGAGCTATGGCACCGGCTTCAAGGCGCCCACGCTCTACCAGCTCTACGCGCCCTATTACGGCAATCTGAACCTTCAGCCGGAACAGAGCGAAGGCTGGGATGCCGGCTTCGAGCAGAAGGCGTTCGGCGAGCGGGTGCTGTTCGGGGTGACGTACTTCCACAACAACATCACCAACCTCATCAGCTACGATCCGGCGACGTACCAGAACGTCAACATCCCCAGCGCCGTGTCGCAGGGCGTGGAGGCGTTCGTGGCGGTGAAGGTGACGGACCGTATCGATGCGCGGGTGGACTACACCTACACCGACGTGGTGGGCTACGTGCCGCCCGGCCAGCCCTTCGGCGCCGCCTGCGCGCCCATCAACGCCACCTCCTGCTATCCCCTGCGGCGGCCCAACAACAAGGTGAGCCTGACGCTGGGCTGGCGGCCCACCGACGAGCTCGATCTGTCGGCGAGCCTCGTCTATGCGTCCTCCTGGTGGGACATCGTGCGTCTCACGTCGAATTACATCGACCAGCCCGGCTATACCGTGGTCAATCTGGCCGCGAACTACCGGCTGAATGCCGTTACCACCGTGTTCGGGCGCATCGACAATCTGTTCAACCAGACCTACGAGAACCCCAACGGCTTCCTCGCCCCCGGCTTCGGTGCCTATGGCGGCGTGAAGCTCACATGGTGA
PROTEIN sequence
Length: 658
MPSLAPSRSRRALPAATLLAFACVPPALAQTADDQNAGDLPTIVVSATGIPTPEDEVASSVSIVTEQDIARNQQRTLPDVLQSLPGLNVVQTGGPGGTTSVFIRGTNSNHVKVLIDGIDAGNPAATNGAFDFGKLLASDLDRVEVLRGPQSGLYGSDAIGGVISVTTKKGEGPPKVTAYAEGGALGTFNQYASLTGATEKLAYSFNVTHFSSTDTPVTPQNIVPPGWPINPNAYDNWTYSTRLDWQATETFAVNFVARYIDTSLAFTPDTYPPPTYAGIPAALRSTAYASMFFTKGEGVWTALDGSLVTTFGVSDMSSSNPTVGPNPDVNGTYDGDRQVYYVRSNYLVAPGQNLLVGAERRNESMTSSTAYASVDASTGDTGVYAEYQGNLWNRLFFAANVRYDADDSFGDHTTFRLAPALLFDETGTKLKASYGTGFKAPTLYQLYAPYYGNLNLQPEQSEGWDAGFEQKAFGERVLFGVTYFHNNITNLISYDPATYQNVNIPSAVSQGVEAFVAVKVTDRIDARVDYTYTDVVGYVPPGQPFGAACAPINATSCYPLRRPNNKVSLTLGWRPTDELDLSASLVYASSWWDIVRLTSNYIDQPGYTVVNLAANYRLNAVTTVFGRIDNLFNQTYENPNGFLAPGFGAYGGVKLTW*