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SCN18_10_11_15_R4_P_scaffold_478_17

Organism: SCN18_10_11_15_R4_P_Rhizobiales_68_13

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 17218..17823

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000255|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01031};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01031}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 201.0
  • Bit_score: 379
  • Evalue 2.20e-102
3-isopropylmalate dehydratase small subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=LEUD_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 201.0
  • Bit_score: 379
  • Evalue 1.50e-102
leuD; isopropylmalate isomerase small subunit similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 201.0
  • Bit_score: 379
  • Evalue 4.40e-103

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAGAAGTTCACGGTCCTGGAGGGCGTCGCGGCGCCGATGAAGCTGGTCAATGTCGACACCGACATGATCATCCCCAAGCAGTATCTGAAGACGATCCAGCGCACCGGCCTCGGCAAGGGGCTGTTCTCCGAGATGCGCTATCTCGACGATGGCGCCGAGAACCCCGGCTTCGTGCTGAACCAGCCCGCCTACCGCTCCTCCAAGATCCTCGTCGCCGGCGACAATTTCGGCTGCGGCTCCTCGCGCGAGCACGCGCCGTGGGCGCTGCTCGACTTTGGCATCCGCTGCGTGATCTCCACGTCGTTCGCGGACATCTTCTACAACAACTGCTTCAAGAACGGCATTCTGCCCATCGTCGTCTCCAAGGACGACCTGGACAAGCTGTTCGATGACGCCGAGCGCGGCGCCAACGCCACCCTCACCATCGACCTGCCGGCCCAGGAAATCCGCGGCCCGGACGGTGGCGTGGTCAAGTTCGAGATCGACCCCTTCCGGAAGCGCTGCCTGGTCGAGGGGCTGGACGATATCGGCCTCACCCTTCAGAAGGCGCCGGCCATCGACCAGTACGAAGCCGCCAAGGGCGCCGAGCAGCCCTGGCTGTGA
PROTEIN sequence
Length: 202
MEKFTVLEGVAAPMKLVNVDTDMIIPKQYLKTIQRTGLGKGLFSEMRYLDDGAENPGFVLNQPAYRSSKILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIVVSKDDLDKLFDDAERGANATLTIDLPAQEIRGPDGGVVKFEIDPFRKRCLVEGLDDIGLTLQKAPAIDQYEAAKGAEQPWL*