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SCN18_10_11_15_R4_P_scaffold_84_7

Organism: SCN18_10_11_15_R4_P_Reyranella_68_349

near complete RP 40 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(6197..7510)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type mannitol/chloroaromatic compound transport system, large permease component n=1 Tax=Polaromonas sp. CF318 RepID=J2TPG2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 465.0
  • Bit_score: 307
  • Evalue 2.10e-80
Uncharacterized protein {ECO:0000313|EMBL:KIL97046.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 467.0
  • Bit_score: 344
  • Evalue 1.30e-91
TRAP-type mannitol/chloroaromatic compound transport permease similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 478.0
  • Bit_score: 295
  • Evalue 1.40e-77

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Taxonomy

SCNPILOT_EXPT_300_BF_Thiobacillus_62_448 → SCNPILOT_EXPT_300_BF_Thiobacillus_62_448 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGCGACGGCCGGCCTCTGGATGCTGCTGGCGGTGGCGATCGTGCTGCTGGCGACCGGGCTGCCGGCCTTTGCCGTATTGATGGGCGTGTCGGTCGCCTTCGCCGCGATCGGCGTGCTGGCGGGCGGGCTCGAATACGGCCTGCTGACGGCGCTGCCGACGCGCATCGTCGGCCTGCTGGAAACCGATCTGCTGCAGGCGCTGCCGCTCTATGTCTTCATGGGCGCGCTGCTCAACCGCCTGCCGCTCGCGGACCGGCTGTTCCGCTGCGGCGTCGCGCTGGGTGGCAAGAGCGGCGGCGCGCCGGCGATGGCGACCCTGGGTCTCGGCGCGCTGCTGGCGCCGATGAACGGCTCGGTGGGCGCCAGCGTCGCCATGTTGTCGCGCAGCGTCGCGCCCAAGCTCACGGCGCGCGGCACGCCGGTACCGGAGAGCACGGCGCTGGTCTGCGTCGCCTCGACGCTCGGCGTGGTGATCCCGCCGTCGCTGGTCCTGATCCTGCTGGGCGACGCCATGATGCGCGCCCACACCGAGGCGGCCAACGTCACCGGGGCGACGGTGCGCATCGTCAACACCCAGGACATCTTCCGCGGCGCGCTGGTGCCGGCGGCGCTGTTCCTGGTGCTCTGCCTGCTGGTCGCCTGGGCGCTCGGCCGCCGCCATCCGGCGCGTAGCGCGGCCGAGAAGCCCGAGGCCCTGGAATGGCTGACCGGCCTCGTCGCCGCCTTGTTCGTGATCGGCCTGCTGACCGGCGTCGCGGCCGGCTACTTCTATGCCGTCGAGGCGGCGGCGATGGGCGGCACGGCGCTGCTGCTGTTCGGCTGGCTGAGCGGCGGCCTCAAGGGCGGCGCGTTCGGCGCGGTGTTGCGCGATACCATGGCGGTGAGCGGCGCGTTGTTCGCGCTGTTCATCGCCGCCACGACCTTCACCCTGGTCTTTCGCGCCTTCGGCACCGACCGGCTGCTCGATGCCTGGGTCAAGCTGGTGCCGTTCGGCGCCACCGGTGCCGCGATCGCCGTGCTGGCGCTGCTCGCGCTGCAGGCCTCGTTCCTGGTGCCGCCGACCGGCTACGCGGTGATGATGGCGCGGAGCGCCATGAAGCAGAAGACGGCGACGCGCCCGCTGGCCCGCGCGCTCGCCCCCTATCTCGCCGCCCAGCTCGTGGTCTTGGCCCTGGTCGTGGCGCTGCCGGGGACAGCCCATTTCGCCCAGCCCAAGGGCCACGACGCCTCGCCGGTCGAAACCAAGCTGGACGACGACGCGGCGCGCCAGAAATTCAACGATATGCTCAACATACCCGCGCCCGAGGACTAG
PROTEIN sequence
Length: 438
MATAGLWMLLAVAIVLLATGLPAFAVLMGVSVAFAAIGVLAGGLEYGLLTALPTRIVGLLETDLLQALPLYVFMGALLNRLPLADRLFRCGVALGGKSGGAPAMATLGLGALLAPMNGSVGASVAMLSRSVAPKLTARGTPVPESTALVCVASTLGVVIPPSLVLILLGDAMMRAHTEAANVTGATVRIVNTQDIFRGALVPAALFLVLCLLVAWALGRRHPARSAAEKPEALEWLTGLVAALFVIGLLTGVAAGYFYAVEAAAMGGTALLLFGWLSGGLKGGAFGAVLRDTMAVSGALFALFIAATTFTLVFRAFGTDRLLDAWVKLVPFGATGAAIAVLALLALQASFLVPPTGYAVMMARSAMKQKTATRPLARALAPYLAAQLVVLALVVALPGTAHFAQPKGHDASPVETKLDDDAARQKFNDMLNIPAPED*