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SCN18_10_11_15_R4_P_scaffold_274_24

Organism: SCN18_10_11_15_R4_P_Reyranella_68_349

near complete RP 40 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(22592..23560)

Top 3 Functional Annotations

Value Algorithm Source
Cobalamin biosynthesis protein CobD n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RTN1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 323.0
  • Bit_score: 369
  • Evalue 2.60e-99
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 323.0
  • Bit_score: 369
  • Evalue 3.60e-99
cobD; anaerobic pathway of cobalamin biosynthesis CobD similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 317.0
  • Bit_score: 363
  • Evalue 5.20e-98

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGTCCCTCGGTCTCGCCCTGATTGCCGGCGCCGTCGAAGCCTGTGTCGGTTATCCGGACGCCCTCTATCGCGCGATCGGGCACCCGGTTACCTGGATCGGGCGGCTCATAGCATGGGTCGACGAGCGGTGGAATTCGGAAGGCGAGAGCGGGCCGCCGCAGAAGCTGCTCGGCGTCATGCTGATGCTGGCTCTGGTGACCGGCGGCCTGCTGATCGGCCTGGTGATCACGCGCGTTTGTTTCGCCGTGCTCGGGCCGTGGCTGGCGCTGATCCCGCTCGCGATCCTGACCGGCAGCCTGCTGGCGCAGCGCAGCCTGCACGAGCATGTCGAGGCGGTCGCCGATGCGCTGGGCAAGGGGCTCGAGCAGGGCCGCGAGGCGGTGGCGATGATCGTCGGCCGCGACACCACGAGCCTCGACGAAGCCGGGGTCTGCCGCGCCGCGATCGAGAGCCTGGCCGAGAGCTTCTGCGACGGCATCGCCGCGCCGATGTTCTGGATCGCAGTTGGGGGTCTGCCAGGCGGCATCGCCTACAAGGCGATCAACACCGCCGACAGCATGATCGGCCACAAGACCGACCGTTACATCGACTTCGGCTGGGCAGCGGCGCGCATCGACGATGTCGCGAATTGGCCGGCGGCGCGATTGGCGGCGGTGTGGCTGGCGGCGGGCGCATTCTTCGTGCCGGGCGCCTCGCCGTCGAAGGCGCTCACCGTTGCCTGGCGCGACGCGGGCAAGCACGATTCGCCCAATGCCGGCTGGCCGGAGGCGGCGATGGCCGGCGCACTCGGTCTGCGCCTGATGGGCCCGCGCACCTACGACGGCGAGATGGTGCAGAAGGGCTGGATGGGCGACGGCCGCTTCGCGCTCAAGGCCGCCGACATTCGCGCCGCGCTCAAGCTCTATCGCGCCGCCTGCGGCGTGCAGCTCGGCGTGCTCGCGGTGCTGTTCGGCCTCACCTTTCTCTAG
PROTEIN sequence
Length: 323
MSLGLALIAGAVEACVGYPDALYRAIGHPVTWIGRLIAWVDERWNSEGESGPPQKLLGVMLMLALVTGGLLIGLVITRVCFAVLGPWLALIPLAILTGSLLAQRSLHEHVEAVADALGKGLEQGREAVAMIVGRDTTSLDEAGVCRAAIESLAESFCDGIAAPMFWIAVGGLPGGIAYKAINTADSMIGHKTDRYIDFGWAAARIDDVANWPAARLAAVWLAAGAFFVPGASPSKALTVAWRDAGKHDSPNAGWPEAAMAGALGLRLMGPRTYDGEMVQKGWMGDGRFALKAADIRAALKLYRAACGVQLGVLAVLFGLTFL*