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SCN18_10_11_15_R4_P_scaffold_649_8

Organism: SCN18_10_11_15_R4_P_Reyranella_68_349

near complete RP 40 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3814..7983

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CDK97244.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 1390.0
  • Bit_score: 2152
  • Evalue 0.0
rpoB; RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 1390.0
  • Bit_score: 2152
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6A94D similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 1388.0
  • Bit_score: 2158
  • Evalue 0.0

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Taxonomy

Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4170
ATGGCCACGGCCTTCAATACGCGCAAAAGAATCCGTCGTTTCTTCGGCCACATCGAATCCGTGGCCCCCATGCCCAACCTGATCGAAGTCCAGAAGAGCTCGTACGAGGGCTTCCTGCAGCGCCTGATCCCGGCGGCCAAGCGCACGCCGACCGGCCTGCAGGAGGTCTTCCGCGGCGTGTTCCCGATCAAGGACTTCGCCGAGCGGGCCAGCCTCGAGTTCGTGAAGTACGAGTTCGAGGAGCCGAAGTACGACGTCGAGGAATGCCAGCAGCGCGGCATCACCTTCGCCGCGCCGCTCAAGGTCACGCTCCAGCTCGTCGTGTGGGACATCGACGAGGAAGCCGGCTCGCGCTCGATCCGCGACATCAAGGAGCAGGATGTCTACATGGGCGACATGCCGCTCATGACCGACAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTGATCGTCAGCCAGATGCACCGCTCGCCGGGCGTCTTCTTCGATCATGACAAGGGCAAGACGCACAGCTCGGGCAAGTACCTGTTCGCCGCCCGCATCATCCCGTACCGCGGCTCGTGGCTCGACTTCGAATTCGACGCCAAGGACCTGATCCATGTCCGCATCGACCGCCGCCGCAAGATCCCGGTGACGACGCTGCTGCTCGCGCTCGACAACGACGCGACCGCGAAGAAGCGGGCGTCGGCCGTCGCCAAGGGCCAGACGCTCGATCCGACCGAGGCCCAGGGCCTGTCGCCCGAGGAGATCCTCGCCGCGTTCTACGGCCAGGTCGTCTACAAGGGCGACAAGGAAGGCTGGACCACGACCTTCGACGCCGAGTCGATGAAGGGCGTCAAGCTCACCCACGACCTGGTCAACGCCAAGACCGGCAAGTCGGTCGCCGAGGCCGGCGCCAAGATGACGCCGCGGCTCCTGAACCGCCTCAAGGAGGCGGGCCTCAAGGAAGTGCGCGTGTCGCCGGAGGAGCTGATCGGCCGCTACGCCGCCGTCGACGTGATCAACGAGAAGACCGGCGAGATCTATGTCGAGGCCGGCCAGGAGATCACCCAGGCGGTGCTCGACCTGTTCGACGAGAACGACATCGACGTGCTGCCGACGCTGGCGATCGACCACACCAACGTGGGCCCGTACATCCGCAACACCCTGGCGGCGGACAAGAACTCCAACCGCGAGGAGGCCCTGCTCGACATCTACCGCGTGATGCGTCCGGGCGAGCCGCCGACGCTGGAGCAGGCGGAGACGCTGTTCGGCGGCCTGCTGTTCGACATCGACCGCTACGACCTGTCGCCGGTCGGCCGCGTCAAGATGAACATGCGGCTCGAGTTCCAGGGCGTGCCCGACACCCAGCGCACGCTGCGCCGCGAGGACATCCTCGCCGTCGTCAAGGTGCTGCACGACCTCAAGGACGGCCGCGGCGAGATCGACGACATCGACCATCTCGGCAACCGTCGCGTCCGCTCGGTCGGCGAGCTGATGGAGAACCAGTATCGCGTCGGCCTGCTGCGCATGGAGCGGGCGATCCGCGAGCGCATGAGCTCGATCGACATCGACACCGTGATGCCGCACGACCTGATCAACGCCAAGCCGGCGGCGGCGGCGGTGCGCGAGTTCTTCGGCTCCAGCCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAAGTGACGCACAAGCGTCGCCTCTCGGCGCTGGGACCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTTCACCCGACGCACTACGGCCGCATCTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCGACCTACGCCCGCGTGAACCAGTACGGCTTCATCGAGAGCCCGTACCGCAAGGTCCACCACAGCCGCGTCACCGACGAGGTGATCTACCTGTCGGCGATGGAGGAGGGCCGCTACACGGTCGCCCAGGCCAACGCCGAGATCGACGCCAAGGGCAAGTTCGTCTCCGAGCTGGTGCAGTGCCGCAAGGGCGGCGAGTACATCCTCGCCCGTCCCGAGACGATCGACTTCGTCGACGTCTCGCCCAAGCAGATCGTGTCGGTCGCCGCGGCGCTGATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGCCAGGCGGTGCCGCTGATCCAGGCCGAATCGCCGCTGGTCGGCACCGGCATGGAAGAGGTGGTTGCCCGCGATTCGGGCGTGGCGATCGCCGCGCGCCGCACCGGCATCGTCGACCAGGTCGACGCCATGCGCATCGTGGTGCGCGCGACCGACGACGTCGGGCCCAACCGGCCGGCGGTCGACATCTACAACCTGCTGAAGTTCCAGCGCTCCAACCAGAGCACCTGCATCACCCAGAAGCCGCTCGTTAAGGTCGGCGACACGGTGAAGAAGGGCGACATCGTGGCCGACGGTCCGTCGACCCGCGATGGCGAGCTGGCGCTGGGCCGCAACGTGCTCGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTGCTCAGCGAGCGCATCGTGCGCGACGACGTCTTCACCTCGATCCACATCGAGGAGTTCGAGGTCATGGCCCGCGACACCAAGCTCGGCCAGGAGGAGATCAGCCGCGACATCCCGAACGTCGGCGAGGAGGCTCTCAAGAACCTCGACGAGGCGGGCATCGTCTATATCGGCGCCGAGGTGAAGGCGGGCGACATCCTGGTCGGCAAGGTGACGCCGAAGGGCGAGAGCCCGATGACCCCCGAAGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCCGCCGACGTGCGCGACACCTCGCTGAAGGTGCCGCCGGGCGTCGAGGGCACGGTCGTCGAGGTCCGCGTGTTCAACCGCCGCGGCGTCGACAAGGACGAGCGCGCGCTCGCCATCGAGCGCGACGAGATCGAGCGCCTGGCCAAGGACCGCGACGACGAAAAGGCCATCCTGGAGCGCAGCTTCTACAGCCAGATCCAGGAAATGCTGATGAACCAGGTGGTGGCCGGCGGCCTCAAGGGCCTCAAGCCGGGCACCCGCATCGTCGACAAGGTGCTGGGCGAGTTCACGCCGGGCCAGTGGCGGCAGATCGCCGTCAAGGGCGACAAGCGGCAGGGCGAGATCGAGGCGGCGAACAAGCAGTTCGACGAGTCGATGAAGCGCCTGCAGGACCGCTTCGACAGCAAGGTCGACAAGCTGCAGCGCGGCGACGAGCTGCCGCCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGACCAAGCGCAAGCTGCAGCCCGGCGACAAGATGGCGGGCCGCCACGGCAACAAGGGCGTGATCTCGCGCATCATGCCGCTCGAGGACATGCCGTACCTCGAGGAGGGCGGGCCGGTCGACATCGTGCTGAACCCGCTCGGCGTGCCGTCCCGCATGAACGTCGGCCAGATCCTCGAGACCCACCTCGGCTGGGCCGCGGCGGGCCTCGGCAAGCGGATCGGCGAGATGGTGACGGCGGGCCGCGAGGCCTCGGCGGCGCAGATCAAGAAGCAGCTCCGCGAGATCTACGGAGAAAAAGCTTACAAGGCCGAGATCGCCGATCTCGACGACGATGCCACGATCGAGCTCGCCCGCAACCTGAGCAAGGGCGTGCCCTTCGCCTCGCCGGTGTTCGACGGCGCCCACGAGGGCGACATCGTCGGCATGCTGGAGATGGCGGGCCTCGACAAGTCGGGCCAGGTCACCCTGGTCGACGGCCGCACCGGCGAGCCGTTCGATCGCAAGGTGACGGTCGGCTACATCTACATGCTGAAGCTGCATCACCTGGTGGACGACAAGATCCACGCCCGGTCGATCGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAGGTCTGGGCGCTCGAGGCTTACGGCGCCGCCTACACGCTGCAGGAGATCCTGACCGTGAAGTCGGACGACGTCGCGGGCCGCACCAAGGTCTACGAGGCCATCGTGCGCGGCGACGACACCTTCGAGGCGGGCATCCCCGAGTCCTTCAACGTGCTGGTCAAGGAGCTGCGCTCGCTCGGCCTCAACGTCGAGCTCAATCAGGGGGCCGAGTAA
PROTEIN sequence
Length: 1390
MATAFNTRKRIRRFFGHIESVAPMPNLIEVQKSSYEGFLQRLIPAAKRTPTGLQEVFRGVFPIKDFAERASLEFVKYEFEEPKYDVEECQQRGITFAAPLKVTLQLVVWDIDEEAGSRSIRDIKEQDVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYLFAARIIPYRGSWLDFEFDAKDLIHVRIDRRRKIPVTTLLLALDNDATAKKRASAVAKGQTLDPTEAQGLSPEEILAAFYGQVVYKGDKEGWTTTFDAESMKGVKLTHDLVNAKTGKSVAEAGAKMTPRLLNRLKEAGLKEVRVSPEELIGRYAAVDVINEKTGEIYVEAGQEITQAVLDLFDENDIDVLPTLAIDHTNVGPYIRNTLAADKNSNREEALLDIYRVMRPGEPPTLEQAETLFGGLLFDIDRYDLSPVGRVKMNMRLEFQGVPDTQRTLRREDILAVVKVLHDLKDGRGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIRERMSSIDIDTVMPHDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNQYGFIESPYRKVHHSRVTDEVIYLSAMEEGRYTVAQANAEIDAKGKFVSELVQCRKGGEYILARPETIDFVDVSPKQIVSVAAALIPFLENDDANRALMGSNMQRQAVPLIQAESPLVGTGMEEVVARDSGVAIAARRTGIVDQVDAMRIVVRATDDVGPNRPAVDIYNLLKFQRSNQSTCITQKPLVKVGDTVKKGDIVADGPSTRDGELALGRNVLVAFMPWNGYNFEDSILLSERIVRDDVFTSIHIEEFEVMARDTKLGQEEISRDIPNVGEEALKNLDEAGIVYIGAEVKAGDILVGKVTPKGESPMTPEEKLLRAIFGEKAADVRDTSLKVPPGVEGTVVEVRVFNRRGVDKDERALAIERDEIERLAKDRDDEKAILERSFYSQIQEMLMNQVVAGGLKGLKPGTRIVDKVLGEFTPGQWRQIAVKGDKRQGEIEAANKQFDESMKRLQDRFDSKVDKLQRGDELPPGVMKMVKVFVATKRKLQPGDKMAGRHGNKGVISRIMPLEDMPYLEEGGPVDIVLNPLGVPSRMNVGQILETHLGWAAAGLGKRIGEMVTAGREASAAQIKKQLREIYGEKAYKAEIADLDDDATIELARNLSKGVPFASPVFDGAHEGDIVGMLEMAGLDKSGQVTLVDGRTGEPFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKELRSLGLNVELNQGAE*