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SCN18_10_11_15_R4_P_scaffold_414_17

Organism: SCN18_10_11_15_R4_P_Reyranella_68_349

near complete RP 40 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(18841..19431)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino acid efflux protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KV75_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 193.0
  • Bit_score: 183
  • Evalue 2.10e-43
Translocator protein, LysE family {ECO:0000313|EMBL:KCB35523.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 193.0
  • Bit_score: 186
  • Evalue 2.60e-44
amino acid efflux protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 193.0
  • Bit_score: 183
  • Evalue 5.90e-44

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGAACGATCTTCTCGGACCATTGGTCCTGTTCGCCGCCGTGATGTGCCTGACGCCAGGGCCGAACGTGGTGCTGGCTACGGCGTCGGCCGCCAACTTCGGCTTCCGCCGCACCCTGCCGCAGATCGCCGGCGTCACCGCGGGCTTCGGCGTGCAGGTGCTGGCGGCGGGACTGGGGCTGGCCGGCCTGTTCCAAGCCGAGCCGCGGCTGCATACCGCGCTGAAGTATGCGGGCGCCGCCTATCTGCTCTGGCTCGCATGGCGCATCGCGACGGCGGCGTCGGCGAAAGCCGGCACGCGGGCGCGGCCGCTCGGCTTCGTCGAGGGCGTGCTGGTCACCTGGGTCAATCCCAAGGGCTGGGTCACAACCATCGGCGCGCTGGCGGCCTTTACACGGCTCGATGGCGACGTGGCGCTGCAGACTGCAGTGATTGCGCTCGTGCTGGCGGCGGCGTGCGGCGGCTCGCTGCTGCTGTGGGCAGGCTTCGGCGCTGTGATCGCCCGCTGGCTGACGAGGCCGGGCGCGCGGCGGGCGTTCAATGGCGCGATGGGCGGCCTGTTGGTGCTGTCGCTGGCGCCGGTGTTTGCCTAG
PROTEIN sequence
Length: 197
MNDLLGPLVLFAAVMCLTPGPNVVLATASAANFGFRRTLPQIAGVTAGFGVQVLAAGLGLAGLFQAEPRLHTALKYAGAAYLLWLAWRIATAASAKAGTRARPLGFVEGVLVTWVNPKGWVTTIGALAAFTRLDGDVALQTAVIALVLAAACGGSLLLWAGFGAVIARWLTRPGARRAFNGAMGGLLVLSLAPVFA*