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SCN18_10_11_15_R4_P_scaffold_91_13

Organism: SCN18_10_11_15_R4_P_Sphingobacteriales_45_140

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(13021..13659)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GN22_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 216.0
  • Bit_score: 221
  • Evalue 4.40e-55
Ligand-binding protein SH3 {ECO:0000313|EMBL:KIA90286.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 213.0
  • Bit_score: 224
  • Evalue 1.20e-55
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 217.0
  • Bit_score: 216
  • Evalue 4.00e-54

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Taxonomy

SCNPILOT_EXPT_1000_BF_Niastella_42_33 → SCNPILOT_EXPT_1000_BF_Niastella_42_33 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 639
ATGATTAAGATTGCATTGGTAGATGATCATGTGGTACTACGCAAAAGCCTGGCCGTACTGATCAATATGTTACAGGATTTCAAGGTAACCATAGAGGCAGGCAATGGCGAGGAGTTCATTGAACAGCTTAAAGAAAAGGGATTGCCGGATATTGCCCTGCTGGATATTACGATGCCGGTAATGGATGGCGTTGAAACAGCCCGCTGGATCAAACAGCATCACCCCCAGGTTAAAGTAGTGGCGTTGAGCATGATCAAGAACGACCTGGTGGTCATCCGTATGCTGAAAAACGGCGCAAGGGGTTACATTCTCAAAGACTGTGAACCGGAAGAGCTTCGCGATGCACTGCACCATGTATATGAAAAGGGGTATTATTATAATGAGCTGCTTACACCCCGTATGAAAGCCAATGACAAATATATCAGCGAAGAAGGCTTGCGTTCTATGATGAATGAAAAAGAACTGGCTTTTCTCCGCTGGACCTGCACCGATAAGACCTATAAAGAAATTGCCGATGAAATGGGCGTGAGCGTACGTACGGTAGACGGCTACCGGGATGCTCTTTTCCAGAAACTCAATGTAACTACCCGGGTAGGTCTGGCTATCTACGCCATCAGGAACGGCATCGTAGTGCTGTAA
PROTEIN sequence
Length: 213
MIKIALVDDHVVLRKSLAVLINMLQDFKVTIEAGNGEEFIEQLKEKGLPDIALLDITMPVMDGVETARWIKQHHPQVKVVALSMIKNDLVVIRMLKNGARGYILKDCEPEELRDALHHVYEKGYYYNELLTPRMKANDKYISEEGLRSMMNEKELAFLRWTCTDKTYKEIADEMGVSVRTVDGYRDALFQKLNVTTRVGLAIYAIRNGIVVL*