ggKbase home page

SCN18_10_11_15_R4_P_scaffold_653_8

Organism: SCN18_10_11_15_R4_P_Sphingobacteriales_45_140

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(11020..12228)

Top 3 Functional Annotations

Value Algorithm Source
anti-sigma factor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6A52D similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 407.0
  • Bit_score: 277
  • Evalue 1.70e-71
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 417.0
  • Bit_score: 261
  • Evalue 3.50e-67
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEV99801.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 417.0
  • Bit_score: 261
  • Evalue 1.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21 → SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1209
ATGTCAGATAATCCAATACGCTTGGCTTACCTTTTTGATCGATACGCTGCCGGAACAGCTACGGTTGCTGAATTGGAGGAGTTCTGGCAATTGGTGGCCCAACTGGATGAAAGGGATGTATTGCCTGAGCGCATGCAGAACTGGTGGGAAGCGTACGAAAGAAGCGATGATAGTGACCTTACCCGAAATGCCGATGGAGCCAAAATCCTGAAACGGATACTGGAAGCAGGTAAGGAAAAGCCCCTGAATTACGTCAGGATACATCGAAGACCGGTATATCGCATGCGCAGAACAGGAGTTGCAGCAGCCGTGTTGTTGATCTTATTAGGAGGTATTGGTTACTGGAGTTATTATGGCAGCATGCCTAAGCCGGCGGATACAACGGCCAAAAGTTTTTTGAAAAATGATGTGTTACCCGGAACCACCAAAGCCACTTTAACATTGGATGATGGCCGTCAGCTGGCGCTTGATACCGTGCAACACGGTTTGCTGGCGGAACAAGGCGTTACCCGGATCAGCAATACCAACGGCGCGCTGGTGTATAATGGTAATGGGAACGATCGGCTGCGGTACAATACGCTTACCACTCACAAAGGAGAGCAGTACCCGCTTATTTTGAGTGATGGCACCCGCATCTTCGCAGACGCTTCTACTACGATCCGGTTTCCGGTTGCATTTACCGGAAGCGAAAGAGTGGTGGAGATCAATGGCCGCGCCTGGTTTGAAGTGGCGAAGAATGCAAAACAGCCTTTTTATGTGGTAAAAGGAGATCAGAAAATACGTGTACTGGGCACTCATTTCGATGTAAATGCCTATGACAACGAAGTTGACATGAAAGTAACGCTGGTGGAAGGCAGTGTGCAGGTGATGAATGGTAAAACCAAGGGATTATTGAAACCGGGGCAACAAGCTGTATTAACCAAGAACAATAGTGGTATCCGGGTAATTGAAGCGGCCGATGTGGAGCAGGCAACTGCCTGGAAGGATGGTGTGATTGCTTTTCATCATGCAGATGTAGCTACCATCATGCGCGAAGTGGAAAGATGGTACGATGTGGATATTACGATCAAGGGCACTTTGCCCAACCGGAGTTTTTATTTCAGTGTACCCCGAACCGTGAAGTTGTCAGAACTGCTTCGTTTTTTAGAAGTGTACAATATCCGCTATGAAATCGATGGTGAGAAACGAAAACTCACCCTGATGCCTTAG
PROTEIN sequence
Length: 403
MSDNPIRLAYLFDRYAAGTATVAELEEFWQLVAQLDERDVLPERMQNWWEAYERSDDSDLTRNADGAKILKRILEAGKEKPLNYVRIHRRPVYRMRRTGVAAAVLLILLGGIGYWSYYGSMPKPADTTAKSFLKNDVLPGTTKATLTLDDGRQLALDTVQHGLLAEQGVTRISNTNGALVYNGNGNDRLRYNTLTTHKGEQYPLILSDGTRIFADASTTIRFPVAFTGSERVVEINGRAWFEVAKNAKQPFYVVKGDQKIRVLGTHFDVNAYDNEVDMKVTLVEGSVQVMNGKTKGLLKPGQQAVLTKNNSGIRVIEAADVEQATAWKDGVIAFHHADVATIMREVERWYDVDITIKGTLPNRSFYFSVPRTVKLSELLRFLEVYNIRYEIDGEKRKLTLMP*