ggKbase home page

SCN18_10_11_15_R4_P_scaffold_1292_2

Organism: SCN18_10_11_15_R4_P_Sphingobacteriales_45_140

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(1065..1937)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein id=3761964 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 292.0
  • Bit_score: 268
  • Evalue 5.50e-69
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 284.0
  • Bit_score: 249
  • Evalue 9.90e-64
Tax=GWA2_Bacteroidetes_32_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 292.0
  • Bit_score: 268
  • Evalue 7.80e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Niastella_42_33 → SCNPILOT_EXPT_1000_BF_Niastella_42_33 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 873
ATGCAGGAGATCATAGGCCGGTTCGGCGACTATTTATACCAGCTGGGTTATGGTAAACAGACCCGGCAGTGCTTATGCGCACAATCCGCTGCATTTTTAGCACACTGTCAGGTAACGGATGTTACACAAATCACGCAAGTGCAGATAAAGGATTTTTACGAGTGGCTGTATGAGTGTCCCGGCAAACGCAGGGGCAGCCAAGGTTTAAGCGAAGGAACGATTGCCCATTATGTCTATGCACTGCAACATTTTTTTTCATGGCTGGAACAAACAGAGCAGATAGCGTACAATCCCATCAGTGGTATTAAGTTTAAACAGCATCATAAGAATAGAAGAGAGCCATTGAGCCGGGAGCAGGTAGAAGCTTTGTTTGCAGCGACAAGGGGTTTACAGGAGTTAGCAGTACTGCATCTTTTTTACAGTTGCGGACTGCGCAGAAGCGAAGCGGTATCGCTGGACACAAGGGATATACATTTTAAACAACAGCTGCTGTATGTGAGAGAAGGCAAGGGCGGTAAACGAAGGGTGATACCACTGACGGCAAGGGTGGCCCATGACCTGGAGAACTATTACAGCAAAGAGCGCTGCCAGCGGGAGCCGTTGCGTGTAAGTGATGAACCAGCGTTTATGCTAGGCAGCCGTGGCATGCGCATGAGCGGGGATGGTTACCAGAGCCTGTTTAAAAAGATCATGGCCAGGTGTACGGACGCAGCACTACCGGAAGGTACGACACTACATCACCTGCGCCACACTATTGCCACAGCTTTGGTACAGGGCGGTATGAGCATGCTCTATGTAAAAGATTTTTTAGGACACAGCAGTTTGGATACCACGCAAGTGTATGCGCGAGCGAAGCAAATAAAATCATTGTAA
PROTEIN sequence
Length: 291
MQEIIGRFGDYLYQLGYGKQTRQCLCAQSAAFLAHCQVTDVTQITQVQIKDFYEWLYECPGKRRGSQGLSEGTIAHYVYALQHFFSWLEQTEQIAYNPISGIKFKQHHKNRREPLSREQVEALFAATRGLQELAVLHLFYSCGLRRSEAVSLDTRDIHFKQQLLYVREGKGGKRRVIPLTARVAHDLENYYSKERCQREPLRVSDEPAFMLGSRGMRMSGDGYQSLFKKIMARCTDAALPEGTTLHHLRHTIATALVQGGMSMLYVKDFLGHSSLDTTQVYARAKQIKSL*