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SCN18_10_11_15_R4_P_scaffold_1350_2

Organism: SCN18_10_11_15_R4_P_Sphingobacteriales_45_140

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 1004..1591

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKS3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 46.3
  • Coverage: 188.0
  • Bit_score: 176
  • Evalue 2.50e-41
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 188.0
  • Bit_score: 176
  • Evalue 7.10e-42
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV99752.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 188.0
  • Bit_score: 176
  • Evalue 3.50e-41

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGCGAAATTCCGACTATATATCTTTTAGTGATCATGAGCTTCTTAACAGGATGCGGTTGGATGACAGCCAGGCATTCACGGAGATTTACGCACGGTATTCGGAATCTCTTTTCGCACGGGCCAAAACCATTCTCCAGCGTTCAGGAAATACAGCAGATATCGTTCAGGAGGCATTCTTATCGCTATGGCAGCGACGAAAAGTTGCACAAATAGAACACCTGGGTAACTACCTTCATCAATCGGTACGTTTCCTGGTTTTTCAGGCGATCAAAGATGGAAAAGCACAACAGAAATTTTTCGATAGGGTTTCACAAGCCTCTCATGAATTATTATTCACAGATCCTTTGCTTTTTAAAGAATTGCAATCCCTTATTCCGGAAATCATGCATGGTCTCCCTGCGGATCAACAACGTATTTTCAGGATGCATCGTGAACAGCAGATGACCTACCAGCAAATTGCGGAAGAATTGAATATCTCGATAAAAACGGTTGAAAAGAAAATGAGCCTGGCGCTCAAAAGCTTTCGCATAAAGACAAACGACCTTATGTTTGCCATGGTACTCCTCTATATGGTTTCAGAACCTTAA
PROTEIN sequence
Length: 196
MRNSDYISFSDHELLNRMRLDDSQAFTEIYARYSESLFARAKTILQRSGNTADIVQEAFLSLWQRRKVAQIEHLGNYLHQSVRFLVFQAIKDGKAQQKFFDRVSQASHELLFTDPLLFKELQSLIPEIMHGLPADQQRIFRMHREQQMTYQQIAEELNISIKTVEKKMSLALKSFRIKTNDLMFAMVLLYMVSEP*