ggKbase home page

SCN18_30_10_14_R3_B_scaffold_244_23

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(30251..31369)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 373.0
  • Bit_score: 592
  • Evalue 2.20e-166
ABC-2 type transporter {ECO:0000313|EMBL:EFI52656.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 373.0
  • Bit_score: 592
  • Evalue 3.00e-166
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 372.0
  • Bit_score: 527
  • Evalue 2.40e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCGCTTCGCATCGAACATCTTCTGGCTCGGCACCAAGGAGCTGCGCAGCTTCTTCAGCGACTGGGTTCTGCTGCTTCTCGTGATCCACTCGTTCTCGCTGGCGGTCTTCAGCCAGGCGCAGAGCAACTCCCAGGAGCTTTTTCACGCTTCGATTGCGATCGTGGATGAAGATCATTCGGCGCTCTCCAGACGGATCACCAATTCTTTTCTCATGCCCTATTTCAAGCCTCCGGTCCTGATCGCGGAATCGGAAAGCCAGGCCTTGATGGATGCCGGAAAGCACACCTTCGTGCTCGATATTCCCCCGAACTTCGAGCGCGATGTTCGGGGCGGCCGCCAGCCAAAACTGCAGCTCAATGTGGATGCGACCGCGATGGTGCAGGCCGGACTGGGATCCGGCTACGCGCAGCAGATCATCAACGCCGCCATCGGGCAGTTTCTGTCGCGCGACGAATCCACCCCTACGTCCCCCGTCGATCTTGTGACAAGAGTCGCGTTCAATCCGAACGTAACGACATCATGGTTTACCAGCGTCATGAGCATCATCGGCAGCGTCAACATGCTGGCGATTATCCTCGCGGGCGCGGCCCTCGTCAGGGAGCATGAGCACGGCACGATGGATCATCTCATGGTCATGCCGCTCACGCCATTTGAGATCGCCATGGCGAAGATCTGGGCCAACAGCCTCGTGATCACCGTCGCGGTCGGTCTGTCGCTGTATGTCGTCGTTCGCCTGCTTTTGAAAGTGCCGCTGGCCGGATCCATCCCGCTGTTCCTGTTTGGCACGATCATTTATCTGTTCTTTGCGACCGGGCTTGGCCTGTTTCTCGGAACCATCGCGCGAACGATGCCGCAACTGGGTCTGCTCTACGTGCTTGTTGCCACGCCGATGAACATTCTTTCCGGCGCCGCGACGCCACTGGAGAGTATGCCCCGGTGGCTCGCCATCACCATGCAGGCTTCGCCATCGACCCATTTCGTGTCGTTTGCGCAGGCGATTCTGTTTCGCGGCGCCGGGCTCGATGTGGTCTGGCCGCAATTTCTTGCGATCACGGGAATCGGCGCGCTGTTCCTGACGCTTTCACTCTTGCGTTTTCGGGCGATCGCATCCGCTTAG
PROTEIN sequence
Length: 373
MRFASNIFWLGTKELRSFFSDWVLLLLVIHSFSLAVFSQAQSNSQELFHASIAIVDEDHSALSRRITNSFLMPYFKPPVLIAESESQALMDAGKHTFVLDIPPNFERDVRGGRQPKLQLNVDATAMVQAGLGSGYAQQIINAAIGQFLSRDESTPTSPVDLVTRVAFNPNVTTSWFTSVMSIIGSVNMLAIILAGAALVREHEHGTMDHLMVMPLTPFEIAMAKIWANSLVITVAVGLSLYVVVRLLLKVPLAGSIPLFLFGTIIYLFFATGLGLFLGTIARTMPQLGLLYVLVATPMNILSGAATPLESMPRWLAITMQASPSTHFVSFAQAILFRGAGLDVVWPQFLAITGIGALFLTLSLLRFRAIASA*