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SCN18_30_10_14_R3_B_scaffold_420_11

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(11598..12491)

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid transport system permeaseprotein LivH n=3 Tax=Oligotropha carboxidovorans RepID=B6JJI2_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 294.0
  • Bit_score: 549
  • Evalue 1.70e-153
branched-chain amino acid ABC transporter permease LivH similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 294.0
  • Bit_score: 549
  • Evalue 4.70e-154
ABC transporter, putative branched-chain amino acid transport permease protein LivH {ECO:0000313|EMBL:AEI05383.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 291.0
  • Bit_score: 545
  • Evalue 4.40e-152

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGCGCGCGGTGGATCAGATGCAATCGATTATCCAGTACACTTTGTCGGGACTTGCGATCGGAGGCTGCTATGCCCTCGTCGCGCTCGGCTTTCACATCATGTGGTCGGCGGCGAAGGCGGTGAACTTCGCCCACGGCGACACGCTCATGCTCGGCGCGGTGCTGACCATCATGGCGATCGATCAGGGCGTCCCGTTGCCGCTCGCCATCGCTGGCGCCGTCGCGGTGTCGTGTCTGTTCGGCATTCTGCTCGAGCGTTTCGCCGTGCGGCCGTTCGCCAAGACCACGAGTTCGATCGGCTGGATGCTGACCACCATCGCCATCGGCATCATGCTGCAGGCGCTGGTGACGATGGAATTCGGCGGCTTCTCGCGCGCACTGCCTTCGCCGGGCGTGGAGAAGGCGATCTCGGTGATGGGGGCCGGCGTCTATCCGCAGGAACTCGTCATTCCCGTCGTCGCATTGGTTGCGATGCTCGGCCTCGGCTGGATGCAGCGCCACACGCTGATCGGCCGCGCGATGCAGGCGGTGTCGTTTGACCGCAACGCCGCTTCGCTGATGGGCATCAACGTCAACTGGATGTTCGGATTCTCCTTCGGTCTCGCCGCTGCACTGGGCGGCGCCGCCGGCATCCTGATCGCGCCAATCACCCAGGCTTCCGCGTCGATGGGTCTGACGCTCGGCCTCAAGGGCTTTGCCGTCGCCATCATTGGCGGCATCACCAGCGCGCCCGGCGTGGTCATCGCCGGTCTTGGTTTCGGCGTCGTCGAGAAATTCGTTGAGGGCTATATTTCCACCGCGGCGCGCGAGATCGTCGGCTTCGGTCTCACCATTCTCGTCCTCCTCGTCTTCCCGCAAGGGCTGTTCGGCAAGCGCGAGGTGTTCAAGGTATGA
PROTEIN sequence
Length: 298
VRAVDQMQSIIQYTLSGLAIGGCYALVALGFHIMWSAAKAVNFAHGDTLMLGAVLTIMAIDQGVPLPLAIAGAVAVSCLFGILLERFAVRPFAKTTSSIGWMLTTIAIGIMLQALVTMEFGGFSRALPSPGVEKAISVMGAGVYPQELVIPVVALVAMLGLGWMQRHTLIGRAMQAVSFDRNAASLMGINVNWMFGFSFGLAAALGGAAGILIAPITQASASMGLTLGLKGFAVAIIGGITSAPGVVIAGLGFGVVEKFVEGYISTAAREIVGFGLTILVLLVFPQGLFGKREVFKV*