ggKbase home page

SCN18_30_10_14_R3_B_scaffold_719_6

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(4392..5144)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8S1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 250.0
  • Bit_score: 385
  • Evalue 3.50e-104
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EFI50559.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 250.0
  • Bit_score: 385
  • Evalue 4.90e-104
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 249.0
  • Bit_score: 377
  • Evalue 1.60e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGTCGCTGGACGTGATCGAGACGCTCGCCTCGTCGCGCGAGCCTTTGACGCTGGGCGAGATCGCGTTGCGTCTCGATCTTTCCAAGGCCGCGGTCCACGGCGTGCTCTCCAATCTGGAAGCGCGGCGTTATGTCGAGCGCGTCTCCGAGCGCGGCGGCTACCGGCTCGGTCATCGGTTGTGGGAGCTCGGCATCGTTGCCGGCGAATCCATCGAACTGGCGAAGGTCGCGCACGCTTATCTGGAGCGGCTGGTCGCCCTCAGCAACGAGAGCTCGCAGCTTGCCGAATACTGCGCGCCCGGCGAGGTGGTCTATCTCGACAAGGTCAACAGCCCCAATCCGGTGCAGGCGCAGATCCATGTCGGGCGCCGCGCGCCGGCGGCCTACGTCGCGACCGGCCGCGCGCTGCTGGCGTTTCAGCCCGAGGCCGAGATCGAACGGGTGTGCAAGGGGCCGCTGCACAGATTTACGGCCAAGACCATCACCGACCCGAAGCGGTTGCGGCGCGAACTCGAACTGACGCGCGAGCGCGGCTACTCGCTCAATCACGGTGAGTATCGCGGCGAGATCGTCGGCGTCGCGGCGCCGATCCGCGATCATCTCGGCAATGTCATTGCCGCCATCAGTATCTCCGGCCCCGAATATCGGTTTTCCGTCGAGCGCGCGGTCGAGTTCGCGCCGGCGGTGATGGCGGCGGCGGAGGATGTGTCGCGCGAACTCGGTCAGCGCTTTATCCAGAAACGTCGTGCATAG
PROTEIN sequence
Length: 251
MSLDVIETLASSREPLTLGEIALRLDLSKAAVHGVLSNLEARRYVERVSERGGYRLGHRLWELGIVAGESIELAKVAHAYLERLVALSNESSQLAEYCAPGEVVYLDKVNSPNPVQAQIHVGRRAPAAYVATGRALLAFQPEAEIERVCKGPLHRFTAKTITDPKRLRRELELTRERGYSLNHGEYRGEIVGVAAPIRDHLGNVIAAISISGPEYRFSVERAVEFAPAVMAAAEDVSRELGQRFIQKRRA*