ggKbase home page

SCN18_30_10_14_R3_B_scaffold_719_15

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 11879..12793

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QG31_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 304.0
  • Bit_score: 515
  • Evalue 3.60e-143
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGP09973.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 304.0
  • Bit_score: 515
  • Evalue 5.00e-143
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 303.0
  • Bit_score: 493
  • Evalue 2.40e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGTCCAAACTTCCCGATTTCGAAGCCCTCGCCATCTTCGCCAAGGTGGTGGAAATGCGCTCGTTCGCTGGCGCCGCGTCCGAGCTTGCGCTGTCCAAGGCCACGGTGTCGAAAGCCGTGACCCGGCTGGAAGCACGGCTCGGCGCGCGGCTGTTCAACCGCACCTCGCGCCAGCTTGCGCTGACCGACGCTGGGCAGCGGCTGTCGCAGCGCGCCGCGCAGTTGCTGGCCGATGGCGAAGCCGCGGAGAACGAGGCGCTGGCGCAGGCGGTCACGCCGCGCGGACTGGTGCGCCTCGCGGTGCCGATGACGTTCGGCGTGAAAAGGATCGCGCCGCTGCTGCCGGATTTTCTCACCGCCTATCCCGAAGTCGCGATCGACCTGCATCTCAGCGACGCCAAGGTCGATCTGATCGGCGAAGGCTTCGATGCCGGCATCCGCATCGGCACACTGCCGGATTCATCTTTGCTGGCGCGGCGGCTATGCGCGATGCCGCGCTACACGGTCGCGGCGCCGTCCTATCTCAAGCGCCATGGCACGCCGACGCACCCGATGCATCTCGGGCAGCACAAATGCTTCGGCTACACCTATCTGTCGACGCCGGGGGTGTGGCACTTCACCAACGCCAAAGGCGAGCAGGCTTCGGTCCGTCCATCGGGCGCGCTGCGCGTCAACAATGGCGAGGCGTTGCTGCCGGCGCTGCTCGCCGGACTCGGCATCGCCAATCTGCCGGAGTTCATCATCGGCGAAGCCATCGCCGCAAGGAAGGTCGAGATCATCCTGAAGGATTGGAAGCAGCCGGAAGGCGCGGTGCATCTGTTGATGCCGCCCGGCGGGCCGCGCCCGGCCCGCGTCGAGGTGCTGGCGGATTTTCTCGCCGCGCGTCTGGGACAAACGAAACGAAAGCCGCGATAG
PROTEIN sequence
Length: 305
MSKLPDFEALAIFAKVVEMRSFAGAASELALSKATVSKAVTRLEARLGARLFNRTSRQLALTDAGQRLSQRAAQLLADGEAAENEALAQAVTPRGLVRLAVPMTFGVKRIAPLLPDFLTAYPEVAIDLHLSDAKVDLIGEGFDAGIRIGTLPDSSLLARRLCAMPRYTVAAPSYLKRHGTPTHPMHLGQHKCFGYTYLSTPGVWHFTNAKGEQASVRPSGALRVNNGEALLPALLAGLGIANLPEFIIGEAIAARKVEIILKDWKQPEGAVHLLMPPGGPRPARVEVLADFLAARLGQTKRKPR*