ggKbase home page

SCN18_30_10_14_R3_B_scaffold_559_23

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 25710..27092

Top 3 Functional Annotations

Value Algorithm Source
Decarboxylase UbiD {ECO:0000313|EMBL:EWY36876.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 459.0
  • Bit_score: 702
  • Evalue 2.60e-199
UbiD decarboxylase family protein id=4827625 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 442.0
  • Bit_score: 438
  • Evalue 8.40e-120
UbiD family decarboxylase similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 457.0
  • Bit_score: 407
  • Evalue 3.40e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGGATAACCAGAGTCTGCGAGGATTTGTGGAGACGGTGGAGAAGGCGGATCCGGGGGACGTGCTTCGTATCACTGCGCCGGTCAGCCGGGACCTCGAGATGACCTCAACGGTTTTCGAATTGGATCGCCAGAACAAAAGCCCGGTCGTGATCTTCGAGAACGTGACGGGCTTCGATATGCCGGTGGTCACGAACGTTGCCGGAAACCGCAGGCTTCTGGCCAATTGCCTGAATGCAACGGTCGAGGATCTTCCCGCCGCCTTCCGTGCGCGGTGCCAGAACTACATCAAGCCCGAGATTGTGCAAGACGCGGCCTGGAACGACATTGTTCTTGAAGGCGACGATGTCGATCTCACGAAGCTGCCGATCCCGTTTCAGTTCACTGTCGATGCCGCTCCGTATATCACGGCCGGGCAAATCACGGCGCGATGCCCCGATACCGGAATCGACACGACCGGCTTTCATCGTCTGATGCTCAAAGGCAAGAACCGTCTCGGCGTGTCGCTTCATTCGCGGCGGCGCATGTACGAATATCATCGCCGGGCGGAGGCGAAGGGGCAATCCTTGCCCGCGGCGATCGTCATCGGCACCCATCCGCTCCACTATATGGGGGCGATGGTCTACGCCTATCCGCCGAACGTGCGAAAGTTCGAAATCATCGGCGGCCTGTTCGGCGAGCCCTACAGGCTGGCGCGTTGCGGCGTTGAGGGTCTTGAGGTGCCGGCGGGTGCGGAAATTGTGATCGAAGGCGAAATCCTCGCCAACGTTCACGAGCCTGAAGGTCCGTTCGGTGAATTCACCGGCTATGCGTCCTACCGAAGCACGGAAAACGTATTCGTCGCCAAGCGCGTGAGGATGCGGCGCAATTGCTATTTCCACAGCGTCGTGTCGGGAATGTCGCGTGATCATATTCTTATCACCTGCATCACGCGCGAAGGTGAAATCCTGAATGCCCTGAAGCGCAACCTGCCGAACGTAAAGGCCGTCCATGTTCCGCACAAAACATGCGGCGCCTTCCTGGCGATCATTTCGATGAAAAAGATCGCGGAAGGCGAGCCCAAGATGGCCGTTCTGGCCACGTTAGGGACGGAGCTCTACACCAAACAGGTGATTGTCGTGGATGACGATGTCGATATCTATGACATGGACGACGTGATGTGGGCCGTCGCGACGCGCGTGCGTGCGGAGCGCGACGTGCTTTTGATTCCCGGCGTGAAGTCCGCGATCATCGATCCGACCTCCGATCCCAATAATTTCACCGTGACCAAGATGGGCATCGATGCGACGGCTCCTCTTGATGAAAAATATGCCGAGAGATTGGTGATCTCGGATGAGCAACGCGCGCGGGCAAGGGAGATCCTGTCTCAAGCCAATATCAATTGA
PROTEIN sequence
Length: 461
MDNQSLRGFVETVEKADPGDVLRITAPVSRDLEMTSTVFELDRQNKSPVVIFENVTGFDMPVVTNVAGNRRLLANCLNATVEDLPAAFRARCQNYIKPEIVQDAAWNDIVLEGDDVDLTKLPIPFQFTVDAAPYITAGQITARCPDTGIDTTGFHRLMLKGKNRLGVSLHSRRRMYEYHRRAEAKGQSLPAAIVIGTHPLHYMGAMVYAYPPNVRKFEIIGGLFGEPYRLARCGVEGLEVPAGAEIVIEGEILANVHEPEGPFGEFTGYASYRSTENVFVAKRVRMRRNCYFHSVVSGMSRDHILITCITREGEILNALKRNLPNVKAVHVPHKTCGAFLAIISMKKIAEGEPKMAVLATLGTELYTKQVIVVDDDVDIYDMDDVMWAVATRVRAERDVLLIPGVKSAIIDPTSDPNNFTVTKMGIDATAPLDEKYAERLVISDEQRARAREILSQANIN*