ggKbase home page

SCN18_30_10_14_R3_B_scaffold_805_30

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(24568..26007)

Top 3 Functional Annotations

Value Algorithm Source
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 486.0
  • Bit_score: 762
  • Evalue 2.20e-217
seryl-tRNA synthetase (EC:6.1.1.11) similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 481.0
  • Bit_score: 716
  • Evalue 4.70e-204
Serine--tRNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9H4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 489.0
  • Bit_score: 762
  • Evalue 1.50e-217

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGCACGATATCAGGTGGATCCGCGACAATCCGGAAGCTTTCGACAAGGCGCTGGGCCGCCGCGGCCTTGAGCCGTTGTTGGCGAGCCTGCTTGCGATCGACGAAAAGCGGCGCAGTGCCATTGTCGCTGCCGAGCAGGCACAAGCGCGGCGCAACGCCGCCTCCAAGGAAATCGGCGAGGCGAAGAAGGCCAAGGACACTACGCGCGCCGATGCGCTGATGGCCGAGGTCGGCGAACTCAAGACCAGGCTGCCGCAACTCGAAGCCGACGCCAAGCGCGCCGAAGAGGATTTGAAGACTGCGCTGGCGCAGGTGCCGAACCTGCCGCTCGACGAGGTGCCGGACGGCGCCGACGAGCACGGCAATATCGTGCATCACGAATACGGCGACCGCCGCAGCTATGGCTTCAAGCCGAAGGAGCATGTCGAGCTCGGCGAGAGTCTCGGCTTCATGGATTTCGAGACGGCGGCGAAGCTGTCAGGCGCGCGTTTTGTCGTTCTGAAAAAGGGTCTTGCACGGCTGGAGCGCGCCATCGGCCAGTTCTTCCTTGATGTGCACACCGGCGAGCACGGCTATACCGAAGTCAATCCGCCGCTGCTGGTGCGCGACGATGCGATGTTCGGCACCGCGCAGTTGCCGAAGTTCCGGGATGATCAATTCGCGGCATCGCGCGGCCCTAGCAACGCGGAACTGTACGAACAGATTAAAGCCGCTGCCATTACCTTAGCTGCAGACGAACTTAAGATACCTCCCGCTGATTTGCGGATTCATGATCTTCTTCCGTTCGAGAAGCGAGTGGTTGCGGATATTCCCTCGGAAATCAACTACTGGCTCATCCCCACCGCCGAGGTGCCGCTGACCAATCTCGTTCGCGAATCCATTCTCGATGAAAAAGAACTGCCGATGCGGCTGACCGCGCTGACGCCGTGCTTCCGCGCCGAAGCGGGCGCGGCGGGACGCGATACCCGCGGCATGATTCGCCAGCATCAGTTCAGCAAGGTCGAGTTGGTCTCGATCACCACGCCGGAAGAAAGCAAGCGCGAGCATGAGCGCATGCTGGCCTGTGCCGAGGAAGTGCTGCGCCGACTCGGGCTGCACTACCGTGTCGTCACGCTGTGCACCGGCGACATGGGCTTTGCGTCACAAAAGACTTACGACATCGAAGTCTGGATGCCGGGGCAGGGCGAGGGCGGCATGTACCGCGAGATTTCGTCGTGCTCGGTGTGCGGCGACTTCCAGGCGCGGCGCATGGATGCGCGCTATCGCGGACCCGACAACAAGCCGCGCTTCGTGCATACGCTGAATGGCTCGGGCACGGCGGTCGGCCGCGCGCTGATCGCGGTGATGGAAACCTATCAGCAGGAGGATGGGTCGATCGCGGTGCCAGACGTGCTGCAGCCTTACATGGGCGGCCTCAAGACCATCGCGAAGGACAACTGA
PROTEIN sequence
Length: 480
MHDIRWIRDNPEAFDKALGRRGLEPLLASLLAIDEKRRSAIVAAEQAQARRNAASKEIGEAKKAKDTTRADALMAEVGELKTRLPQLEADAKRAEEDLKTALAQVPNLPLDEVPDGADEHGNIVHHEYGDRRSYGFKPKEHVELGESLGFMDFETAAKLSGARFVVLKKGLARLERAIGQFFLDVHTGEHGYTEVNPPLLVRDDAMFGTAQLPKFRDDQFAASRGPSNAELYEQIKAAAITLAADELKIPPADLRIHDLLPFEKRVVADIPSEINYWLIPTAEVPLTNLVRESILDEKELPMRLTALTPCFRAEAGAAGRDTRGMIRQHQFSKVELVSITTPEESKREHERMLACAEEVLRRLGLHYRVVTLCTGDMGFASQKTYDIEVWMPGQGEGGMYREISSCSVCGDFQARRMDARYRGPDNKPRFVHTLNGSGTAVGRALIAVMETYQQEDGSIAVPDVLQPYMGGLKTIAKDN*