ggKbase home page

SCN18_30_10_14_R3_B_scaffold_741_4

Organism: SCN18_30_10_14_R3_B_SCNPILOT_CONT_500_BF_Rhizobiales_64_17-related_63_20

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1925..2893

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AL76_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 31.2
  • Coverage: 253.0
  • Bit_score: 108
  • Evalue 1.10e-20
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.0
  • Coverage: 322.0
  • Bit_score: 125
  • Evalue 2.40e-26
Putative transcriptional regulatory {ECO:0000313|EMBL:KGJ71001.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.6
  • Coverage: 322.0
  • Bit_score: 125
  • Evalue 1.20e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → SCNPILOT_CONT_500_BF_Rhizobiales_64_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGCCGAAATTTCATTTCACATCCGATCAGCTTCCGTCCGCCCTTCCGGCGCGCATGCGCGCGAAGCTGTGGACGAACTCCATGGATGCGATCGGGTCTTCCTTCGAAATGGGAATCGTCACGAGCCGGAAGTTTCACGGCGAAGTGTCTGTTCTGCAGCTCGGCAGAATACAACTCGGCTCAGCAAAGACGATTGCAGATGGCGCGGTGAATGTGGTGCGCGCCGAAGCCAAGATTCGTCAAGATGCCGATGATCGGATCATGATCCTCATCAACCGCGGCGAAACGCCGATGAGCGTTCGTCAGTTCGACCGTAAAATCGAACTGAAACGCGATGAGATGACCGTCTTGACGATGGATATGCCAAGCGAGTGCTCGACACCGCAAAGCGGCCATTCGCATGTTGTCCTTCTGCCGCGCGAGATTTTGCAGCAGCCCGGACGCATGCTCGAGCTATTTTCTGCGACGCGCCTGAAAACGCATCGCACGGTCCAGCTCCTGCTCAGTCAAAATATTCAGCAATTGCTTTGCGCCGAAGAGGATCTCGATCAATCGCTGGAAATCGCATCAGGCGAATATATCGTCCATCTCGTCAGCACCATTCTGCAGCCGCAAGGTTCGCAGTCCACCAAGCCACAAACCAAAAAGCCTGATAAGCGCATTGCGGATATTCGCAAGCAGATCGCGCGCAGCTATCGCGCTCCCGACCTCAATCCGGAAGCGATCGGCGAACGGCTGGGCATGTCCGCGCGATCGATACAACATGCCTTGAGTCAGCACGGTTCGACTTTCAGCGAAGAACTGATGGCGATGAGACTGGAAGCTGCATTTGGAATGCTCCGAAGCGGCGCAACCGACGCGATCGCAGACATTGCATTCAAATGCGGTTTTTCCGATCTTTCGACCTTCTATCGCGCATTCCGCACGCGTTACGGCAAGACTCCGAATTCCGCCCGGGTGACGAAGTAA
PROTEIN sequence
Length: 323
MPKFHFTSDQLPSALPARMRAKLWTNSMDAIGSSFEMGIVTSRKFHGEVSVLQLGRIQLGSAKTIADGAVNVVRAEAKIRQDADDRIMILINRGETPMSVRQFDRKIELKRDEMTVLTMDMPSECSTPQSGHSHVVLLPREILQQPGRMLELFSATRLKTHRTVQLLLSQNIQQLLCAEEDLDQSLEIASGEYIVHLVSTILQPQGSQSTKPQTKKPDKRIADIRKQIARSYRAPDLNPEAIGERLGMSARSIQHALSQHGSTFSEELMAMRLEAAFGMLRSGATDAIADIAFKCGFSDLSTFYRAFRTRYGKTPNSARVTK*